Paenibacillus sophorae: KP014_24645
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Entry
KP014_24645 CDS
T07500
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
psop
Paenibacillus sophorae
Pathway
psop03410
Base excision repair
psop03430
Mismatch repair
psop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KP014_24645 (recJ)
03430 Mismatch repair
KP014_24645 (recJ)
03440 Homologous recombination
KP014_24645 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psop03400
]
KP014_24645 (recJ)
DNA repair and recombination proteins [BR:
psop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KP014_24645 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KP014_24645 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KP014_24645 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
tRNA_anti-codon
ThiG
DUF7185
Motif
Other DBs
NCBI-ProteinID:
QWU15057
LinkDB
All DBs
Position
complement(5082135..5084543)
Genome browser
AA seq
802 aa
AA seq
DB search
MLYSKTKWHSPVADPVQSRELARRLSVSPLVASLLAARGMAVPEEALAFINAGTEEEHDP
FLLKGMKEAVPRIKKALQEEEHILVYGDYDADGVSSTSLMIYLLRHLGASFDIYIPHRSG
EGYGLHNHALDWALQQGVSLIITVDTGISACSQIAYANELGMDVIVTDHHEPPEVLPAAY
ALINPKLPGCPYPFKGLAGVGVAYKLAQALLDGKVPEEWLEIAAIGTIADLMPLLDENRA
IVRRGLKSMRRSKYAGIRALLEVSAVSVENVDAVNVAFAVAPRINASGRLDHAGRAVSLL
TTDDPVEAERLAGELDLLNKERQMVVERIVAEAISRLEERIKDGRLPGIIVLAGEGWNVG
VVGIVASKLLERYYRPVIILDIHPETGCCKGSARSIPGLDIYEALSSCSELMDHFGGHPA
AAGMSLHLDNLEAFTSALEEFALGVLTDEHLVPVTEADGEYALADLSLKAAEELELLAPF
GMSNPLPKFIVREAVVKETRTMGQGNRHLKLVLQQGGATVEAVAFGKGELAELLPPGTGI
DVLAELSINEWNGSRKVQLMLKDLSVPQPQLFDFRGVRDAAGRTQRLWNLLLPQTGGRQG
LAAAVVRKDWLKEQELPECQGMTFWVYDQYNGISPVDNLPGEDDGSHVSLLCLLDMPETT
QQLDALLQTFPEVENIALLHSLRQERERLLVPTREQFKMLYKWLAAIAAVPVPEQEALLR
LSRKSPMSLRMLRMMLDVFEELDFIRREQGQLSFVTRPAARDLASSSHFMRLSELAEMEQ
YFMEGSPSELQEWMESRRLGAS
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
ttgctttattcaaaaaccaaatggcactctccggttgccgatcccgttcaatccagggaa
ttggcccggagactttctgtttctccactggttgcttccctgcttgccgcgagggggatg
gcagtgccggaggaagctcttgcatttattaacgctggaacggaagaagagcatgacccg
ttcttgttgaaagggatgaaagaggctgttccccggattaaaaaagcgctgcaggaagag
gaacatattcttgtatatggagattacgacgccgacggagtatccagtacgtctctgatg
atttatctgctgcgtcatctgggggcttctttcgatatttatatcccgcaccggtcgggc
gagggctacggacttcataaccatgcgctcgattgggcgctgcagcaaggcgtctcactg
attatcacagtggatacgggtattagcgcatgcagccaaatcgcttatgcgaacgaactg
ggaatggatgttatcgtaacggaccaccatgagccgccggaggttctgcctgccgcttac
gcgctcattaatccgaagctgcccggctgcccgtatccgttcaagggattggccggagtg
ggagttgcctacaagctggctcaggcccttctggacggtaaagttccggaagagtggctg
gagattgccgccatcggaacaatcgccgacctgatgccgctgcttgatgagaaccgcgcc
attgtacgccggggccttaagagtatgcgcagatcgaaatatgctggcattcgggctctg
cttgaagtgagcgccgtaagtgtggagaatgtggacgcggtcaatgtcgcatttgcggtt
gcaccgcgcattaacgccagtgggcgacttgatcatgccggacgggccgtgtcgctattg
accacggatgatcccgtagaagcggaacgccttgccggagaactggacctgctaaataaa
gagcgacagatggttgtagagcggattgttgcggaggcgatcagccgtttggaagagaga
attaaggacggaaggcttccgggcattatcgttctggccggggaaggatggaacgtcggg
gttgtcggcatagtagcttccaagctgttagagcggtactacagaccggtgatcatattg
gacatccatccggagacgggctgctgcaaaggctcggcgcggtccattccgggccttgat
atctacgaggcgctttcctcctgctctgagcttatggatcactttggtgggcatccggcg
gcggcaggcatgagcttacacctggacaatctggaggcatttacctcagcgcttgaggaa
ttcgctttaggagtcctgactgatgagcatttggtgcctgtcactgaggcggacggagag
tatgcgctggccgatttgtcgctgaaggccgccgaggagcttgaactgctggctcctttc
ggtatgagcaacccgctgccaaagttcattgtgcgggaagcggtggtgaaggagacgcgc
actatgggccagggcaatcggcatctgaagcttgttctgcaacagggaggcgcgacagtc
gaagccgttgctttcggtaagggggagctggcagaactgcttcctcccggcaccggtatt
gatgtgctggcggaattgtcgattaacgaatggaatggctcccgcaaggtccagcttatg
cttaaggatttgagcgtccctcagccgcagctgtttgattttcgcggggtgcgggacgcc
gccggcaggacgcagcgcctgtggaatttgctgctgccccagaccggcggcagacaaggt
ctggccgcggctgtggtccgtaaagattggctgaaagagcaagagctgccggaatgtcaa
gggatgaccttttgggtatatgatcaatataacggaatttctccggtagacaatctgcct
ggggaagatgacggaagccatgtatctctgctgtgcctgctggatatgccggaaacgacg
cagcagcttgatgcattgctgcagacctttccggaggtagagaatatcgccctgctgcac
tcgctccgccaggagcgggagcggctgcttgttccgacgagagaacaatttaagatgctc
tataaatggctggccgccattgccgccgtaccggttccggaacaggaagcgctgctacgg
ctcagccgcaaatcgccgatgagtctgcggatgctgaggatgatgctagatgtattcgaa
gaacttgattttataagaagagagcaggggcagctgtcctttgtgacccggcccgctgcc
cgggacctcgcttcctcaagccattttatgcgcctcagcgaattggcggaaatggagcaa
tattttatggaaggaagtccgtccgagctgcaagaatggatggagtcgcgccgcctcggc
gcatcctaa
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