Paenibacillus sophorae: KP014_26420
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Entry
KP014_26420 CDS
T07500
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
psop
Paenibacillus sophorae
Brite
KEGG Orthology (KO) [BR:
psop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psop03000
]
KP014_26420
Transcription factors [BR:
psop03000
]
Prokaryotic type
Helix-turn-helix
Other families
KP014_26420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
AAA_2
AAA
PAS_4
Mg_chelatase
PAS_8
PAS
PAS_9
PAS_7
HTH_7
MAPKK1_Int
T2SSE
AAA_30
AAA_16
AAA_3
IclR
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QWU15371
LinkDB
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Position
complement(5465619..5467481)
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AA seq
620 aa
AA seq
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MAGVNPQQGKGVQVSKEELARRMEEKSLLISVAKPIMNSIYQVIKDTVYAIVLTDQDGVL
LSTLLNKKIEPECAKVNFFEGAKWDELSVGTNAVGTALAVDMPIQVLGGEHYCESHHAWT
CSAAPIHDSSGRVIGCLDLSGKAEDVHPHTFGIAVSAVSSIEEQLNVLETNQLMNAVFQS
MQDGLLVIDTEYRIRQFNERLASIFMLAMEEVRRLDIKELLQDVDLDGVFRNKRCISYAD
CTLTVNGRKIDCMANILPYSFGDRVIGASLTIREARQVRREVNQLAGFKANYRFEDIVTH
NPYMQEQIDFARKIARTNCTVLIEGESGTGKELFAQSIHNASSRADGPFIAINCAALPRE
LVESELFGYEKGSFTGALREGNPGKFELANGGTLFLDEIGELPLEIQAKLLRVLDNHKVR
RLGGKHERTLDVRVIAATNRDLLEEIAQKTYRSDLYYRLNVINLKLLPLRERAEDLAPLA
QLFLHKCNRDNPGPAKRFGPAFLERLQDRQWKGNARELQNAVQRAYYLCGSDCISESDTV
RIQSGQKESTLPDPLPTLAHAFESADPRAVKSMRQSEIESIRCALAASGGNVVGAARMLN
IGKSTLYRKLAEYGIGREEA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggctggggttaacccgcagcagggaaaaggggtgcaggtatccaaggaggagctggcg
cggcggatggaagagaagagcctgctcatttccgtagccaaaccgattatgaacagcatc
tatcaagtgatcaaggatacggtttacgccatcgttctgaccgaccaggatggagtgctg
ctcagcaccctgcttaacaaaaagattgagccggagtgcgcgaaggtgaatttcttcgag
ggggcaaaatgggatgagctcagcgtcggcaccaacgccgtcggaaccgcgctggccgtc
gacatgccgatacaggtgctcgggggcgagcattactgcgaatcgcatcacgcttggacc
tgctcagcagcccctattcatgatagctccgggagagtgatcggatgcctggacctgtca
ggcaaagcggaggatgtgcatccccacaccttcggcatcgccgtgtcggccgtaagcagc
atcgaagaacagcttaacgtgctggagacgaaccagctgatgaatgccgtatttcaatcg
atgcaggacggactgctggtcattgatacggaataccggatcagacagtttaatgaacgg
ctggcctccatttttatgctggcgatggaagaggttcggaggctggatattaaggaactg
ctgcaggatgtcgatctggacggcgtgttccggaacaagcgctgcatcagttatgcggat
tgcacgcttacggttaatggcagaaagatcgattgcatggccaatatcttaccgtactcc
tttggcgatcgggtcatcggggcgtcgcttacgatccgggaagccaggcaggtgcgcaga
gaggtcaatcagcttgccggcttcaaggcgaactaccggtttgaggatatcgtaacccat
aatccttatatgcaggaacagatcgattttgcaaggaaaatcgccagaacgaactgcacg
gttctgatcgaaggagagagcggaaccggtaaagaactgtttgcccagtccattcataac
gccagctcgcgcgcggacgggccgtttatcgccattaattgcgcggcgctcccgagagaa
ttggtagaaagtgaactgttcgggtatgaaaaaggctcctttaccggcgcgctgcgtgaa
ggcaatcccggaaagttcgagctggcgaatggcggaaccctatttctggacgaaatcggg
gaactgccgctggagatccaagccaagctgctgcgggtgctggataaccacaaggtccgg
cggctcggcggcaagcatgaacgcacgttggacgtccgggtcatagcggccaccaaccgc
gatctgctggaggaaatcgcgcagaagacttaccgcagcgacttgtattaccggctgaat
gtcattaacctcaagctgcttccgctgagggagcgtgccgaggatctcgcgccgcttgct
cagctcttcctgcacaagtgcaatcgggataatcccgggccggccaaacggtttggcccc
gcttttctggaaagactgcaagaccggcagtggaaagggaatgcgcgtgaactgcaaaac
gcggttcagcgcgcctactatttatgcggctcggattgtatttccgaatcggatacggtc
cggattcagtccgggcagaaggagagtaccctcccggacccgctccccacgctcgcccat
gcgttcgaatctgctgatccccgcgcagtcaagagcatgcggcagagcgaaatagagagc
atccgctgcgcgttggcagcaagcggcggaaatgttgtgggggccgcccggatgttgaat
atcggcaagtcgaccctgtaccgcaaactggcggaatacggcattggcagagaagaggct
tga
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