Paenibacillus sophorae: KP014_26795
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Entry
KP014_26795 CDS
T07500
Name
(GenBank) response regulator transcription factor
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
psop
Paenibacillus sophorae
Pathway
psop02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psop00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KP014_26795
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psop02022
]
KP014_26795
Two-component system [BR:
psop02022
]
NarL family
LiaS-LiaR (cell wall stress response)
KP014_26795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
DUF6115
HTH_23
Sigma70_r4
HTH_40
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QWU15438
LinkDB
All DBs
Position
complement(5540655..5541308)
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AA seq
217 aa
AA seq
DB search
MENGEPIKVLLVDDHEMVRIGLAAVLGTEEGIEVVGEAGNGEEGIRLAQEYKPDVVLMDL
VMEGMDGIETTRQVMRLYPECKVIVLTSYLDDEKMYPVIEAGAFSYLLKTSRASEVADAI
RAAARGQSVLVSEVASKMMNRFRSDARIEAPAHSELTDREMEVLKLLAQGKSNQDIADQL
IIGIKTVKFHVTNILAKLGVEDRTQAAIYAYKNGLAE
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggagaatggcgaaccgattaaagtgctgctggtggacgaccatgaaatggtcagaatc
ggactggctgcggtgctggggactgaggaaggaatcgaagtggtcggcgaggccggaaac
ggtgaggaaggcattcgcttggcgcaggagtacaagccggatgttgtgctcatggacctg
gtgatggaaggaatggatggcattgagacaacgaggcaggtaatgaggctgtaccccgag
tgtaaggtgattgtgctgacaagctatttggatgatgaaaaaatgtacccggtcatcgag
gccggcgctttcagctacctgctcaaaacctcgcgcgccagtgaagtggcggatgcgatc
cgggcggcggcccggggacagtccgttctggtctcggaggtcgcatccaaaatgatgaac
cggttccgcagcgacgcccggattgaagctccggctcattcggagctgaccgaccgggag
atggaagtgctgaagcttctggcgcaggggaaatcaaaccaggatattgccgaccagctt
attatcggcatcaagacggtgaagttccacgtcacgaacattcttgccaaactgggcgtg
gaagaccgcacgcaggcggccatctacgcttacaagaacggcctggccgagtag
DBGET
integrated database retrieval system
