Paenibacillus sophorae: KP014_27215
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Entry
KP014_27215 CDS
T07500
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
psop
Paenibacillus sophorae
Brite
KEGG Orthology (KO) [BR:
psop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psop03021
]
KP014_27215
Transcription machinery [BR:
psop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KP014_27215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_38
HTH_50
HTH_Tnp_ISL3
TnsD
GerE
HTH_28
KORA
HTH_29
HTH_24
MarR_2
MarR
DUF1492
HTH_3
HTH_10
HTH_31
Phage_antitermQ
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
QWU15500
LinkDB
All DBs
Position
complement(5603956..5604726)
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AA seq
256 aa
AA seq
DB search
MNERVTPPESLDESVSLIWEYQQTKDNDIATTLIHRYEPMVKMAAGKIARNRPDLYEDLY
QVGQMALIRLLQQYDISLGIPFEPYAMKSMIGHMKNFLRDKSWYIQVPRRIKEKGALVQQ
AIDELTVKLERSPDVGEIARYLDLSVEEAVEVLAGRECYHYVSLDSPLSQEETGATLGEL
ISSDANDYDTVERRMDLQQALGQLKEQEQKVLLLAFQEGQSQRAIAQKLGVSQMSVSRIQ
KRATEKLKQIMSNSTY
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaagagtgactcccccagagtccttggacgaatccgtctctcttatttgggaa
tatcagcagaccaaagataatgacatcgccaccactttgattcatagatacgaaccgatg
gtcaagatggccgcaggaaagattgcccgcaaccgccccgatctttatgaagacctctat
caggtcggtcagatggctctgatccgcctcctgcagcaatacgatatcagccttggtatt
ccttttgagccctatgccatgaagagcatgatcgggcatatgaagaattttctccgcgat
aaatcctggtacatacaggttcccagacgcatcaaagaaaaaggcgcattggtccagcag
gcgattgacgaactgaccgtcaagctggagcgttcacccgatgtgggcgaaatcgcgcgt
taccttgatctgtctgtggaggaagcggtggaagttcttgccggaagggaatgttaccat
tacgtatcgctggattccccgctgtctcaggaagagaccggcgccacgctgggcgaactg
atcagctcggatgcgaacgactatgataccgtagagcggcgcatggaccttcagcaggcg
cttggacaattgaaggagcaggagcagaaggtgctgctgctggcattccaggaagggcag
tctcagcgggctatcgcccagaagctgggtgtatctcagatgagcgtatcgcgaattcag
aaacgggctaccgagaagctgaaacagattatgtccaattcgacgtattga
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