Paraclostridium sordellii: RSJ16_00320
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Entry
RSJ16_00320 CDS
T05252
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
psor
Paraclostridium sordellii
Pathway
psor03030
DNA replication
psor03430
Mismatch repair
psor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSJ16_00320
03430 Mismatch repair
RSJ16_00320
03440 Homologous recombination
RSJ16_00320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psor03032
]
RSJ16_00320
03400 DNA repair and recombination proteins [BR:
psor03400
]
RSJ16_00320
Enzymes [BR:
psor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSJ16_00320
DNA replication proteins [BR:
psor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RSJ16_00320
DNA repair and recombination proteins [BR:
psor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RSJ16_00320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
DnaX_C
AAA_22
RuvB_N
AAA_5
DNA_pol3_delta_C
AAA_24
AAA_18
TniB
AAA_30
AAA_assoc_2
ResIII
RCF1-5-like_lid
AAA_7
PIF1
AAA_19
AAA_2
Gp44_lid
Mg_chelatase
AAA_16
EndoS_Ig-like
Motif
Other DBs
NCBI-ProteinID:
AUN12815
LinkDB
All DBs
Position
19838..21478
Genome browser
AA seq
546 aa
AA seq
DB search
MHKALYRAYRPQNFKDVVGQNHIIRTLKNQIQNNNVGHAYLFCGTRGTGKTSTAKIFARA
VNCENSIDEEPCNECEVCKDILNDNIMDVIEIDAASNNSVDDIREIRENVKYTPAKCKYK
VYIIDEVHMLSQGAFNALLKTLEEPPAYVIFILATTEPHKIPATILSRCQRFDFKRVTVK
DMATRMKEICDDVNIEVDERALNLIARNSQGALRDALSILDQCMSFSEGNIEYKDVVDLL
GTVNIEQLFEMAEYVIKEDTKKCLEILNEFVIWGKDIKNLVDDLIDHFRNLMVCKVSKDL
DEIISLPDETVELLKSQSSLIETNEIIRILNILSTTQDAIKSSTNPRVLAEVSIMKLSQP
MFDDSKEALLKRISTLEETIRSGNIKINNIETKESIEVEKEIVQEQPKEEVYYEEVKSED
VKLIEKSWENILMHIKKDKNMPVYAILREAREFNVNSNNLYIMFDDNFAFAKNKLSDSNT
LEYVESIVRETINRSFSIKIILRSESKNIKLEIEKEEKDKGEEILEEVFPKEILDIKESI
AENEIK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgcataaggcactttatagagcctatagacctcaaaattttaaagatgttgtagggcaa
aatcatataattagaactttaaaaaatcagatacaaaataataatgttggacatgcatat
ttattttgtggaactagaggtacaggaaaaacctctactgctaaaatatttgctagagca
gttaactgtgaaaatagcattgatgaagaaccttgtaatgagtgtgaggtttgtaaagat
atattaaatgacaacataatggatgttatagaaatagatgcagcatcaaacaatagtgtt
gatgatattagagaaataagagagaatgtaaaatatacacctgcaaagtgtaaatataaa
gtctatataatagatgaggttcatatgttatctcaaggtgcatttaatgcattacttaaa
acattagaagaacctccagcatatgtaatctttattttagcgactacagaacctcataaa
ataccagcaacaatactttcaagatgtcaaagatttgactttaaaagagtaacagttaaa
gatatggcaactagaatgaaagaaatttgtgatgatgtaaatatagaagtagatgaaaga
gctttaaacttgattgctagaaattctcaaggagcacttagagatgcacttagtatattg
gatcaatgtatgtcttttagtgaaggcaatatagaatataaagatgtagttgatttacta
ggaacagttaatatagaacaattatttgaaatggcagaatatgtaataaaagaagataca
aaaaaatgtttagaaattttaaatgaatttgtaatatggggaaaagacataaaaaatctt
gtagatgatttaatagatcactttagaaacttaatggtatgcaaagtatctaaagatcta
gatgaaataatatcacttccagacgaaactgtagaactgcttaaaagtcaatcaagttta
atagagactaatgaaattataagaatacttaatatattatctactactcaggatgctata
aaatcgtcaacaaatccaagagtattagctgaagtcagtataatgaaattatctcaacct
atgtttgatgatagcaaagaagcattattaaaaagaatatctaccttagaagaaactata
agaagtggaaatataaaaataaataatattgaaactaaagaatctatagaagtagaaaag
gaaattgtacaagaacaaccaaaggaagaagtttactatgaagaagtgaaaagtgaagat
gttaaacttatagaaaaatcttgggaaaatatacttatgcatattaagaaagataaaaat
atgcctgtatatgcaatattaagagaagctagagaatttaatgtaaattcaaataaccta
tatataatgtttgatgataattttgcttttgcaaaaaataaattaagtgatagtaatact
ttagaatatgttgaaagtatagttagagaaactataaatagaagttttagtataaagata
atattaaggtcagaaagtaagaatataaagcttgaaatagaaaaagaagaaaaagataaa
ggggaagagatactagaagaagtatttcctaaagagatattagatataaaggaaagtata
gccgaaaatgaaattaaataa
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