Paraclostridium sordellii: RSJ16_00925
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Entry
RSJ16_00925 CDS
T05252
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psor
Paraclostridium sordellii
Pathway
psor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RSJ16_00925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psor03021
]
RSJ16_00925
03400 DNA repair and recombination proteins [BR:
psor03400
]
RSJ16_00925
Enzymes [BR:
psor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RSJ16_00925
Transcription machinery [BR:
psor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RSJ16_00925
DNA repair and recombination proteins [BR:
psor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RSJ16_00925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF2325
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AUN12882
UniProt:
A0A9P1KX87
LinkDB
All DBs
Position
95657..96604
Genome browser
AA seq
315 aa
AA seq
DB search
MIEIEKPRVDIIEISEDHRYGKFVIEPLERGYGITIGNALRRILLSSLPGVAVNSIRIDG
VLHEFSTVPGVKEDVTEIILALKELSATIDGEGNRTLKIEAQGPCTVTGADIICPPDVEI
ISKDLHIATLDDNSKFNMEISVNKGRGYISSEDNKTEHMPIGVLPVDSIYTPVEKVSYHV
ENTRVGQKSDYDKLILEVWTNGSINPQEGISLAAKVLVEHLNLFIDLTEHVSNVEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVEELANKSEEDMMKVRNLGKKSLEEVI
QKLEELGLGLKPSEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaatagaaaaaccaagagtagatataattgaaattagcgaagaccatagatat
ggtaaattcgttatagagcctctagaaagaggatatggaataactataggtaatgcatta
agaagaatattattatcttctttaccaggagtagctgttaactctataagaatagatgga
gttcttcatgagttctcaacagttcctggtgttaaagaagatgttactgaaataatatta
gcattaaaagaattatcagctactatagatggtgaaggaaatagaacacttaaaatagaa
gcacaaggaccatgtacagtaacaggtgctgacataatatgtcctccagatgttgaaata
ataagcaaagacttacatatagctacgctagatgataattctaagtttaacatggaaata
tctgtgaataaaggaagaggttatatctcttctgaagacaataaaacagagcatatgcct
ataggagttcttcctgtagattcaatatatactcctgttgaaaaagttagctaccatgtt
gaaaatactagagttggtcaaaaatcagattatgataaattaatacttgaagtttggact
aatggaagtataaatcctcaagaaggaatatcacttgcagctaaggttctagttgaacat
cttaatctattcatagatttaacagagcatgtaagcaatgttgaaataatggtagaaaaa
gaagaagatcaaaaagaaaaagttcttgagatgactatcgaagaattagacttatcagtt
agatcttacaactgtttaaagagagcgggaataaatacagttgaagaattagctaataaa
tctgaagaagatatgatgaaagttagaaacttaggtaaaaagtcattagaagaagtaatc
cagaagttagaagaacttggattaggtcttaaaccaagcgaagagtaa
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