Paraclostridium sordellii: RSJ16_01720
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Entry
RSJ16_01720 CDS
T05252
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
psor
Paraclostridium sordellii
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psor03009
]
RSJ16_01720
Enzymes [BR:
psor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RSJ16_01720
Ribosome biogenesis [BR:
psor03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RSJ16_01720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
MTS
Methyltransf_25
TRM5-TYW2_MTfase
PrmA
Cons_hypoth95
Methyltransf_15
RrnaAD
Methyltransf_11
N6_N4_Mtase
Methyltransf_4
FtsJ
DOT1
PCMT
TPMT
CMAS
Methyltransf_23
AAA_lid_10
Motif
Other DBs
NCBI-ProteinID:
AUN13007
LinkDB
All DBs
Position
263987..265345
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AA seq
452 aa
AA seq
DB search
MLLKDREYVVDIVDIGQGGVGIGKHEGFTVFVDGGLLQDKLKVRINKSKKNYAVGDIVEI
LEKSPFRVERKCGKHLAKCGGCQIQELDYKKQLDIKTNEVKQTISRIGKLDDVLIHPTLG
MESPLRYRNKAQFPIQKQNGKTVIGFYKKKSHDVIPTDTCIIQHDVNDKIIKIIKTYIKA
YDVSLYDEKTHTGVLRHLVTKVGFKTKEVMVVLVANGKKLPYLNELASVLKENVPGFKTL
VLNTNREKTNVILGKENKVIYGNGKINDYIGDLVFEISPLSFFQVNPLQTEVLYNKALEY
AQLKEDDTVFDIYCGIGTISLFLAQKAKKVYGVEIVEDAIKDANINAKLNNLDNTEFYVG
KAEEVVPKLYKEGKTANVVVVDPPRKGCENSVLDTIVSMEPERVVYVSCNPSTLARDLAY
LDERGYSCTEVQPVDMFPHTMHVECVAKLIKK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgttattaaaagacagagagtatgtagtagacattgttgatataggacaaggtggagtt
ggaattggaaagcatgaaggatttacagtttttgtagacgggggactattacaagataaa
ctaaaagttagaattaataaatcaaagaaaaactatgcagttggtgatattgtagaaatt
ttagaaaaatcaccatttagagttgaaagaaaatgtggtaagcatttagctaaatgtggt
ggatgtcaaatacaagaattagactataaaaagcaattagacattaaaactaatgaagta
aaacaaactattagtagaatcggaaaactagatgatgtattaattcaccctacgttagga
atggaaagccccttaagatatagaaataaagctcaatttccaatacagaaacaaaatgga
aaaacggtaataggtttttataaaaagaaaagtcatgatgttatacctacagatacttgt
ataattcaacatgatgtaaatgataaaataataaaaataataaaaacttatataaaggca
tatgatgtaagtttatatgatgagaaaacacatacaggtgttttaagacatttagtaact
aaagttggatttaagacaaaggaagttatggttgtattagttgcgaacggaaaaaaatta
ccatacttaaatgaattagcatctgtattaaaagaaaatgtaccaggatttaagacttta
gtattaaatacaaatagagagaaaactaatgttatattaggaaaagaaaataaagttata
tatggcaacggaaaaataaatgattatataggtgatctagtatttgaaatatctccacta
tcgttttttcaagttaatcctttacaaacagaggttttatacaataaggcacttgaatat
gcacaattaaaagaagatgatacagtatttgatatatactgtggtataggaactatatct
ttatttttagctcaaaaggctaaaaaagtttatggagtggaaattgttgaagatgcaatt
aaagatgctaatataaatgctaaattaaacaatttagataatacggaattttatgtagga
aaagctgaagaagtagttccaaagttatataaagaaggtaaaacagctaatgtagtggta
gtagatccacctagaaaaggatgcgaaaactcagttttagatactattgtttcaatggaa
ccagaaagagttgtttatgtatcatgtaacccttcaacactagcaagagatttagcatat
ttagatgagagagggtatagttgtacagaagttcagccagttgatatgttccctcatact
atgcatgttgagtgtgtagctaaattaataaaaaaataa
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