Paraclostridium sordellii: RSJ16_02815
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Entry
RSJ16_02815 CDS
T05252
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
psor
Paraclostridium sordellii
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psor03400
]
RSJ16_02815
Enzymes [BR:
psor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RSJ16_02815
DNA repair and recombination proteins [BR:
psor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RSJ16_02815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AUN13208
LinkDB
All DBs
Position
509503..512949
Genome browser
AA seq
1148 aa
AA seq
DB search
MSLRFIFGRGGSGKTTYCLEEISKEVQSEETSPIILLVPEQYTFESEKRLSKYIEKDPYL
RSRVLSFKTLSNIVFSQVGGLTDININSSGRSMMIYKALEGVSEDLKIFSKASTQPGFIG
TIADMISEFKQYSITPDALENVAGELQSETLKLKLQDISKIYDSYEKILHENYVDSQDLL
ASLADKIELCSYFNNAKIYIDEFTGFTPNQYKVIRSLLTKASEVNITLTLDNNLVKTYNK
RDVFSRTKFTEEKLKKLCLEAGVKIKPEISLNSKQIKRFNGNLELEHLESNYYSYPYKTY
EEETKSICIKEFSNLYSEVEQIAKEIVFLVREEGFRYKDITVATRDLNRYGFLVQSIFNE
YEIPNFIDSKKEAKTNPIIVLIISALEMQSRKYNYETMFRYLKSGLIGLSIEDISLIENY
VLANGIKGKKWFEEKWNYRLNHKLNDEESEVELEIIEKVNKIKDVIINPIVKLQKKLKGR
NKAKDICRYIYEFLIDIDIPETIKNMIDDFKSKNEINLANQYSQVWEIVVDILDQIVEIM
GEDFISLDKFIKVISIGFDEYELATVPPSLDQVLVSSVDRMKNPNTKHLYLMGTTDGIFP
LISKDDGILNDKDRENLGDSGIEVDIDSKTKTFEEQFLVYRALTSTSQSLTVTYPIADHE
GKTLRPSVIISRLKKIFPNIKNESYLNDVEYKSNEEIANNITTKSPIFNELIKSIKDYEE
EKKIEDIWLDVYRFYIKDDEYHVRAKNIVEGLNYTNQVKKVESDKIRELYNNKLFSVSRL
EKYAQCPFAYFIQYGLKAKERKEFEFTPPDFGTFVHNILDKFSKQLSKDNLDWRDITDEY
ISEKVEIIVEELVSKIPGYILESSARYKYLAYRLKNMLISAIAIISYQIRKGSFDPTDYE
VKFGINEKYPPIKIILDNGEEINLIGQIDRVDTLQEEKQKYIRIVDYKSGNKDISLTDVY
HGLQLQLLVYLDAILESSKHNGGDINPAAILYFKIDDPIIKTNENKEDESIKEEILKKLK
MKGLVLKDSNVIKKMDNTLPDGEKGTSLVVPASINKDGTISKTTSGVNQEEFDILRKYVK
QTIKELSEDMLDGDISISPYKTKESSSCDFCSFSSICQFDSTFKDNSYRIINKKSQDEII
NKMKGDVE
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttaggtttatctttggaagaggtggtagtggaaagacaacgtattgtctagaa
gaaatttctaaagaagtacaaagtgaagaaacatcacctataatattgttggtgccagaa
caatatacgtttgaaagtgaaaaaagattaagtaagtatatagaaaaagatccttacctt
agatcaagagtattaagttttaaaactctaagtaatatagtattttcacaagtaggagga
cttacagatataaatataaactctagtggaagatccatgatgatatataaagctttagaa
ggagtaagtgaagatttaaaaatattttcaaaagcttcaactcagccaggctttataggt
actattgcagatatgatatctgagtttaaacaatatagtataacacctgatgctttggag
aatgtagctggagaattacaaagtgaaactttaaaactaaaattgcaagatataagtaaa
atttatgatagttatgaaaagattctccatgaaaactatgtagattcacaggatttattg
gcatcattagccgataaaattgaactatgtagttattttaataatgcaaagatatacata
gatgagttcacaggatttacgcctaatcaatataaagttataagaagtttattaacaaaa
gcaagtgaagtcaatatcacgttaactttagataataatttagtaaaaacttataataaa
agagatgtattttctcgtactaaatttactgaagagaagttaaaaaaattatgtttagaa
gcaggtgtaaaaattaagccagaaataagcctaaattcaaaacaaataaaaagatttaat
gggaatttagaattagagcaccttgaaagtaattattattcctacccttataaaacatat
gaagaagaaactaaaagtatatgcataaaagagtttagtaatttatattcagaagtagaa
caaatagctaaggaaatagtatttttagttagagaagaagggtttagatataaagatata
actgtggctacaagagatttaaatagatatggatttttagttcaatctatatttaatgaa
tacgaaattcctaattttattgattctaaaaaagaggctaaaacaaatccaattatagta
cttataatatctgcactagaaatgcaaagtagaaaatataattatgaaactatgtttaga
tacttaaagagtggcttaataggattgagcatagaagatataagcctaatagaaaattat
gtcttagcaaatgggataaaaggtaagaaatggtttgaagaaaaatggaactataggtta
aatcataaacttaacgacgaagaaagtgaagttgaattagagataattgaaaaagttaat
aaaataaaagatgtgataataaatcctatagtaaaactacaaaaaaaattaaagggaaga
aataaagcaaaggatatatgtagatacatatatgaatttttaattgatatagatatacct
gaaactataaaaaatatgatagatgattttaagtctaaaaatgaaataaatttagctaat
cagtattctcaggtttgggaaatagtagttgatatattggatcaaatagttgagattatg
ggagaagattttatcagtttagataagtttataaaagttataagtataggatttgatgaa
tatgagttagcaacagttccacctagtttagatcaagttttagtcagtagtgtagataga
atgaaaaatccaaatacaaagcatttatacttaatgggtactacagatggtatattccca
ttaatatctaaggacgatggaatattaaatgataaagatagagaaaatttgggtgatagt
ggaattgaagttgatatagatagtaaaactaaaacttttgaagaacaatttttagtgtat
agagcattaacatcaacatctcaatcattgacagtaacttaccctatagctgatcatgaa
ggaaaaactttaagaccatcagttataatatctagacttaagaaaatattccctaatata
aaaaatgaaagttatttaaatgatgtagagtataaatcaaatgaagaaatagcaaataat
ataactaccaaatctcctatttttaatgaactaataaaatcaataaaagattatgaagaa
gaaaaaaagatagaagatatatggttagatgtatatagattttatataaaagatgatgaa
tatcacgttagagctaagaacatagttgaaggattaaattacacaaatcaagttaaaaaa
gttgagagtgataaaataagagaattatataacaataaattatttagtgtttcaaggtta
gaaaaatacgcacaatgtccatttgcatattttatacagtatggattgaaagcaaaagaa
agaaaagaatttgagtttacaccaccggattttggtacatttgttcacaacatactagat
aaattttcaaagcaattatcaaaggataatttagattggagagatataactgatgaatat
atatctgaaaaggtagaaattatagttgaagaattagtatctaaaataccgggatatata
ttagaaagttcagcaagatataaatatttagcatataggttaaaaaatatgcttatatcc
gcaatagctataattagttatcagataagaaaaggatcatttgatccaacggattatgaa
gttaaatttggaataaatgaaaaatatcctcctattaaaattatattggataacggagaa
gaaataaatttaattggacaaatagatagagtagacacattacaagaagaaaagcaaaag
tatataagaatagtagattataagtcagggaataaagatataagtcttactgatgtatat
catggacttcaattgcaactattagtatatttagatgctatattagagagttcaaagcac
aatggtggagatataaacccagcggctattttatatttcaaaatagatgatccaataata
aaaactaatgaaaataaggaagatgaaagtatcaaagaggaaatacttaagaagttaaag
atgaaaggacttgtactaaaggatagtaatgttattaaaaagatggacaatacacttcca
gatggtgaaaaaggaacatcattagttgtgccagcatctataaataaagatggaacaata
tcaaaaactacatcaggggtaaaccaagaagagtttgatatccttagaaaatatgttaaa
cagacaataaaagaattaagtgaagatatgttagatggagatatatcaatttctccgtat
aagacaaaagaatcaagctcttgtgatttttgtagtttttcatctatttgtcaatttgat
agtacatttaaagataatagttataggattataaataaaaagagtcaggatgaaataata
aataaaatgaaaggagatgttgaataa
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