Paraclostridium sordellii: RSJ16_03090
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Entry
RSJ16_03090 CDS
T05252
Name
(GenBank) penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
psor
Paraclostridium sordellii
Pathway
psor00550
Peptidoglycan biosynthesis
psor01100
Metabolic pathways
psor01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RSJ16_03090
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RSJ16_03090
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psor01011
]
RSJ16_03090
Enzymes [BR:
psor01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RSJ16_03090
Peptidoglycan biosynthesis and degradation proteins [BR:
psor01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RSJ16_03090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF648
Motif
Other DBs
NCBI-ProteinID:
AUN13256
UniProt:
A0A9P1KZS1
LinkDB
All DBs
Position
569393..572407
Genome browser
AA seq
1004 aa
AA seq
DB search
MNKNTKFDRLDIIKFLIVGMLCIIFIKIAYMTTFKHEHYDDIAKTKTYKEIPVKAPRGEI
KDRYGRTIATNRNSFTVQISRDGVEKKDKSGKTKANEISLELMNLLEKNKEEYVDEFPIY
VENGKYFYTFDKKIRDFKKDNGIPLEFDAKQSFNYMVDKAIEEKKVDASIKDLKPEEIQA
KLNSAGVYPPILVNDWKFTEQRNKEDWIKSYDIKNIKTNAKDAFREIRKYYKIPSDLSNT
DARKIMLVRDALKSQSFSQYKPVTIAKDVKQDTISQIEERAIEMPGVSIASEPVRYYPEK
ELAAHTLGTMGKINEDELAKKEKDGDNRYTKNDVVGKTGIELFYEDKLRGTDGYKKVEVD
AVGRISKEISSQAPKSGDTVYLSLDKDLQKVSDDSLERIIKAARSGGTYTSEFGNYSTAG
KTAPYLDSGATITLDVKTGDVLAMSSYPSYDPNLFATGISSEDYEKLKPKNPNDLIGANP
LNNLVTRGAFQPGSTFKMITGMAALENGLNPNYHINDPGVIYLGNRPFADYVWHHGRSNH
GYTNLYRALQESCNIYFYTVGTGKNWTGGEDPHIDMGPDKILQYAKLFGLNDNTGLDKEI
GESKGSVPNKEDKLKNTENSLRADLDKSMRNAFSDITKEKDPEEYNKRINEIVSWTKENP
SRTETMKRLEKLHVKEDKVTEIADLAKFNYFNYGNWSDADTFNLAIGQGENAYTPAQVAR
YVAAIANGGKLVEASVVDKTISSDFKNIHVDSNKIIDIPFKDKNHLKDLTQGMKQVATQG
GGKSVFGNFPVQVAVKTGTAEKSGKVPTEDEYKYLIDHMGSYGVSKDEAVKLAEKFQKEA
NEKAKKEFEAQQKAKKEKKEKEDKKLFGKDKKEEKETEAEFVPDNSEATKVRYLRKAIKE
LNPKLTDDQIDSYKQNYPSFAWSVGFAPADNPEIAVVTVLPKGDSSSLALLPVREIMGEY
FGLTKKHKEEAENTNKTGENANKEAEAVKPKGENEMNFASQVKK
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatacaaagtttgataggcttgatattatcaagtttttaatcgtaggtatg
ttatgtataatttttattaagatagcttacatgacaacttttaaacatgaacattatgat
gatatagcgaaaacaaagacatataaagaaatacctgttaaagcaccaagaggtgaaata
aaagacagatatggacgtacaatagctacaaatagaaactctttcacagttcaaatatct
agagatggtgttgaaaagaaggataaatcgggaaaaactaaagctaacgaaatatctcta
gaactaatgaacttgttagaaaagaataaagaagagtatgtagatgaatttccgatatac
gttgagaatggaaaatacttctacacattcgataaaaaaattagagactttaaaaaagat
aatgggatacctttagaatttgatgctaaacaaagttttaactatatggttgataaagct
atagaggaaaagaaagtagatgcatccattaaagatttaaaaccagaagaaatacaagct
aaattaaattcagcaggagtatacccaccaatattagtaaatgactggaagtttacggag
caaagaaataaagaggactggataaagtcatatgatattaaaaatataaaaactaatgca
aaggatgcatttagagaaataagaaaatattataaaatacctagtgatttatcaaataca
gatgctagaaaaataatgttagttagagatgctcttaaatcacaaagtttctctcaatat
aaacctgtaacaatagcaaaggatgtaaaacaagatacgatatctcagattgaagaaaga
gctattgaaatgccaggggtttctatagcatctgagcctgttagatactatccagaaaaa
gaacttgctgcccataccttaggaactatgggaaaaataaatgaagatgagctagccaaa
aaagagaaagacggagataacagatatactaaaaatgatgttgttggtaaaacagggata
gaattattttatgaagataaattaagaggtacagatggatacaaaaaagtagaggtagat
gctgtaggaagaataagtaaagagatttcatctcaagctccaaaatcaggagacaccgta
tacttaagtttagataaagatttacaaaaagtttcagatgattctttagaaagaataata
aaagctgcaagaagtggtggaacatatacaagtgaatttggaaattatagtacagcagga
aaaactgctccatacctagattcaggggcaactataactctagatgtaaaaactggagac
gtactagctatgtcaagttacccaagttatgatccaaacctatttgcaacaggaatatca
tctgaggattatgaaaaattaaaacctaaaaatcctaatgatcttataggtgcaaatcct
cttaataacttagttacaagaggtgccttccagcctggatctacatttaagatgataact
ggtatggcagcattagaaaatggattaaatccaaattaccatataaatgacccaggagtt
atatacttaggtaatagaccttttgccgattatgtatggcatcatggtagatcaaaccat
ggatacacaaacttatatagagcgctacaagaatcttgtaatatttatttctatactgtt
ggtacaggtaagaactggacaggtggagaagatcctcatatagatatgggaccagataaa
atattacaatatgcaaaattatttggattaaatgataacactgggcttgataaggaaata
ggagaaagtaaaggtagtgttcctaacaaagaggataaattaaagaatactgaaaattca
ttaagagcagatttagataaatcaatgagaaatgctttttcagatataactaaagaaaaa
gacccagaagagtataataaaagaattaatgaaatagtaagttggacaaaagaaaatcca
tcaagaacagaaactatgaaaagactagaaaaacttcatgtaaaagaagataaagttact
gaaattgcagatttagctaaatttaactattttaactatggtaactggtcagatgcagat
acattcaacttagctataggacaaggtgagaatgcttatactccagcacaagttgctaga
tatgtagcagctatagcaaatggcggaaagcttgttgaagcttctgtagtagataaaaca
atatctagtgattttaaaaatatacatgtagattcaaataaaattatagatatacctttt
aaagataaaaatcatcttaaagatttaactcaaggtatgaaacaagttgcaactcaaggt
ggaggtaaatcagtatttggaaacttcccagttcaggttgcagtaaaaacaggaacagcc
gagaaaagtggtaaggtacctacagaggatgaatataaatatttaattgatcacatggga
tcttatggagtttctaaggatgaagctgttaaactagctgaaaagttccaaaaggaagct
aatgaaaaagctaaaaaagagtttgaagcacaacaaaaagctaaaaaagaaaagaaagaa
aaagaagataaaaaattatttggaaaagataagaaagaagaaaaagaaactgaagcagaa
tttgttccagataatagtgaggctacaaaagttagatatttaagaaaagcaatcaaggag
ttaaatcctaaattaactgatgatcaaatagatagttataagcaaaattatccatctttt
gcttggtcagtaggtttcgcaccagcagataatcctgaaatagcagtagttacagtttta
cctaaaggtgattcaagtagtttagcattattacctgtaagagaaataatgggagaatat
tttggattaaccaaaaaacataaagaagaagcagaaaatactaataaaactggagaaaat
gcaaataaagaggcagaagctgtaaaacctaaaggcgaaaatgaaatgaattttgcatca
caagtgaaaaaataa
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