Paraclostridium sordellii: RSJ16_03265
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Entry
RSJ16_03265 CDS
T05252
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psor
Paraclostridium sordellii
Pathway
psor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RSJ16_03265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psor03400
]
RSJ16_03265
Enzymes [BR:
psor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RSJ16_03265
DNA repair and recombination proteins [BR:
psor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RSJ16_03265
Prokaryotic type
RSJ16_03265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AUN13288
LinkDB
All DBs
Position
608009..608683
Genome browser
AA seq
224 aa
AA seq
DB search
MINIGNDWDELLKGEFEKPYYLELREFLKNEYSTKIIYPNMYDIFNALKYTSYKDTKVLI
LGQDPYHGENQAHGLAFSVKPGVKTPPSLLNMYKELNSEYGCFIPNNGFLVPWTEQGVLL
LNTALTVRAHEANSHKGKGWEVFTDNIIKLLNERHDPVIFVLWGNNARSKKKLIDTQKHY
IIESAHPSPLSASRGFFGSKPFSKINEILISLGKTPIDWQIPNI
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgattaatataggaaatgattgggatgaattgttaaaaggagaatttgaaaagccttat
tacttagagttaagagagttcttgaaaaatgaatatagtacaaagattatatatccaaat
atgtatgatatttttaatgcattaaaatatacttcatacaaagatactaaagtcttgata
ttaggtcaagatccttatcatggagaaaatcaagctcatggacttgctttttcagtaaaa
cctggagttaagacacctccatctttacttaatatgtataaggaattaaattcagagtat
ggatgcttcatacctaataatggatttttagtaccatggactgaacaaggagtactttta
ctaaatacagctcttacagttagagcacatgaagctaattctcataagggtaaaggatgg
gaagtttttactgataacataataaaactattaaatgagagacacgatccagttatattt
gttctttggggaaacaatgcaagaagcaagaaaaagctaattgatactcagaaacattat
attattgaatctgctcatccaagtccattatcagcaagtagaggtttttttgggtctaag
ccattttcaaaaattaatgaaattctaattagtcttggaaaaacgcctatagattggcag
atacccaatatataa
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