KEGG   Paraclostridium sordellii: RSJ16_04400
Entry
RSJ16_04400       CDS       T05252                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
psor  Paraclostridium sordellii
Pathway
psor03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RSJ16_04400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psor03019]
    RSJ16_04400
Messenger RNA biogenesis [BR:psor03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     RSJ16_04400
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH
Other DBs
NCBI-ProteinID: AUN13501
UniProt: A0A9P1KZG6
LinkDB
Position
843289..844830
AA seq 513 aa
MDVIEAIISALLGIFVGIIVGYFVRKNISEAKIGQAEKMADDIIDKAKKDAETLQKEKLL
EAKEEIHKWRNEAEKENKERRTELQKFERRLIQKEEVLDKKLQTLENKENVLSDKLKKVE
KKEEQVENIKVQQLEKLENISGITSDKAKEIILTNAERDVRREMSIMIKEIESQAKEEAD
KKSREIIGYAIQKCAADHVAETTVTVVNLPNDEMKGRIIGREGRNIRTLETLTGIDLIID
DTPEAVILSGFDPIRREVARIALEKLIADGRIHPARIEEMVEKARKEVDSIIKEFGEQAT
FETGVHGLHPELVRLLGRLNYRTSYGQNVLRHSIEVAHIAGIMAAEIGADVKLAKRAGLL
HDIGKAVDHEMEGTHVEIGMDLLRRYKESKDVIHAMSTHHGDYEPQTIEAVLVTAADAIS
AARPGARRETLEAYIKRLEKLEEIANSYDGVDKSFAIQAGREIRIMVKPENVNDEDIHLL
ARDMTKRIEDELEYPGQIKVSIIRETRAIEYAK
NT seq 1542 nt   +upstreamnt  +downstreamnt
gtggatgtcatagaggcaataataagcgctttattgggaatatttgtgggtattatagtt
ggttattttgtaagaaaaaacatatctgaagctaagattggccaagctgagaagatggcc
gatgatataatagataaagcaaaaaaagatgcagaaactctacaaaaagaaaaactatta
gaagcaaaagaagagatccataaatggagaaatgaagcagagaaagaaaataaggaaaga
agaactgaattacaaaaatttgaaagaagattaatacaaaaagaagaagttttagataaa
aaacttcaaactctagagaacaaagaaaatgttttaagcgataagttaaaaaaggttgag
aagaaagaagagcaagttgaaaacataaaagttcaacaattagaaaagttagaaaatata
tctggaataacttctgataaagctaaggaaatcattttaactaatgcagaaagagacgta
agacgtgaaatgtctataatgataaaagaaatagagtctcaagcaaaagaagaagcggac
aagaaatctagagaaataataggatatgctatacaaaaatgtgcagcagatcatgttgca
gaaactactgttaccgtagttaacttacctaatgatgagatgaaaggtagaatcatcggt
agagaaggtagaaacataagaacattagaaacacttactggtatagatttaataatagat
gatactccagaagctgttatattatcaggattcgatcctataagaagagaagttgcaagg
atagctcttgaaaaacttatagcagatggtagaatacatccagctagaatcgaagaaatg
gttgaaaaagctagaaaagaagtagatagtattattaaagaatttggggaacaagctact
tttgaaacaggggtacatggattacatccagagttagtaagacttttaggtagattaaat
tatagaactagttatggtcaaaatgtcttaagacattctatagaagttgcacatatagca
ggtataatggcagctgaaataggtgcagatgtcaaattagctaagagagctggtctttta
catgatataggaaaagctgtagatcatgagatggaaggtactcatgtagaaataggtatg
gacttacttagaagatataaagaatctaaagatgttatccatgctatgagtacacatcat
ggtgattatgagccacaaactatagaagccgtattagttactgctgcagatgctatatca
gcagctagaccaggagctagacgtgaaactctagaagcgtatattaaacgtttagaaaaa
cttgaagaaattgcgaactcatatgatggtgttgataaatcatttgcgatacaagcgggt
agagagattagaataatggttaaacctgaaaatgtaaatgatgaagatattcatttacta
gctagagatatgactaagagaatagaggatgaattagaatatccaggacaaataaaagtt
agtataataagagaaacaagagcaatagaatacgctaaataa

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