Paraclostridium sordellii: RSJ16_04400
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Entry
RSJ16_04400 CDS
T05252
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
psor
Paraclostridium sordellii
Pathway
psor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSJ16_04400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psor03019
]
RSJ16_04400
Messenger RNA biogenesis [BR:
psor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RSJ16_04400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
AUN13501
UniProt:
A0A9P1KZG6
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All DBs
Position
843289..844830
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AA seq
513 aa
AA seq
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MDVIEAIISALLGIFVGIIVGYFVRKNISEAKIGQAEKMADDIIDKAKKDAETLQKEKLL
EAKEEIHKWRNEAEKENKERRTELQKFERRLIQKEEVLDKKLQTLENKENVLSDKLKKVE
KKEEQVENIKVQQLEKLENISGITSDKAKEIILTNAERDVRREMSIMIKEIESQAKEEAD
KKSREIIGYAIQKCAADHVAETTVTVVNLPNDEMKGRIIGREGRNIRTLETLTGIDLIID
DTPEAVILSGFDPIRREVARIALEKLIADGRIHPARIEEMVEKARKEVDSIIKEFGEQAT
FETGVHGLHPELVRLLGRLNYRTSYGQNVLRHSIEVAHIAGIMAAEIGADVKLAKRAGLL
HDIGKAVDHEMEGTHVEIGMDLLRRYKESKDVIHAMSTHHGDYEPQTIEAVLVTAADAIS
AARPGARRETLEAYIKRLEKLEEIANSYDGVDKSFAIQAGREIRIMVKPENVNDEDIHLL
ARDMTKRIEDELEYPGQIKVSIIRETRAIEYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtcatagaggcaataataagcgctttattgggaatatttgtgggtattatagtt
ggttattttgtaagaaaaaacatatctgaagctaagattggccaagctgagaagatggcc
gatgatataatagataaagcaaaaaaagatgcagaaactctacaaaaagaaaaactatta
gaagcaaaagaagagatccataaatggagaaatgaagcagagaaagaaaataaggaaaga
agaactgaattacaaaaatttgaaagaagattaatacaaaaagaagaagttttagataaa
aaacttcaaactctagagaacaaagaaaatgttttaagcgataagttaaaaaaggttgag
aagaaagaagagcaagttgaaaacataaaagttcaacaattagaaaagttagaaaatata
tctggaataacttctgataaagctaaggaaatcattttaactaatgcagaaagagacgta
agacgtgaaatgtctataatgataaaagaaatagagtctcaagcaaaagaagaagcggac
aagaaatctagagaaataataggatatgctatacaaaaatgtgcagcagatcatgttgca
gaaactactgttaccgtagttaacttacctaatgatgagatgaaaggtagaatcatcggt
agagaaggtagaaacataagaacattagaaacacttactggtatagatttaataatagat
gatactccagaagctgttatattatcaggattcgatcctataagaagagaagttgcaagg
atagctcttgaaaaacttatagcagatggtagaatacatccagctagaatcgaagaaatg
gttgaaaaagctagaaaagaagtagatagtattattaaagaatttggggaacaagctact
tttgaaacaggggtacatggattacatccagagttagtaagacttttaggtagattaaat
tatagaactagttatggtcaaaatgtcttaagacattctatagaagttgcacatatagca
ggtataatggcagctgaaataggtgcagatgtcaaattagctaagagagctggtctttta
catgatataggaaaagctgtagatcatgagatggaaggtactcatgtagaaataggtatg
gacttacttagaagatataaagaatctaaagatgttatccatgctatgagtacacatcat
ggtgattatgagccacaaactatagaagccgtattagttactgctgcagatgctatatca
gcagctagaccaggagctagacgtgaaactctagaagcgtatattaaacgtttagaaaaa
cttgaagaaattgcgaactcatatgatggtgttgataaatcatttgcgatacaagcgggt
agagagattagaataatggttaaacctgaaaatgtaaatgatgaagatattcatttacta
gctagagatatgactaagagaatagaggatgaattagaatatccaggacaaataaaagtt
agtataataagagaaacaagagcaatagaatacgctaaataa
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