Paraclostridium sordellii: RSJ16_04525
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Entry
RSJ16_04525 CDS
T05252
Name
(GenBank) arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
psor
Paraclostridium sordellii
Pathway
psor00330
Arginine and proline metabolism
psor01100
Metabolic pathways
psor01110
Biosynthesis of secondary metabolites
Module
psor_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RSJ16_04525
Enzymes [BR:
psor01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
RSJ16_04525
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
SepSecS
Beta_elim_lyase
GDC-P
Motif
Other DBs
NCBI-ProteinID:
AUN13523
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Position
876023..877522
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AA seq
499 aa
AA seq
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MEAIGEKLEDNFFSDPILSHKQTPLLTSLKDYSNKDIACFDVPGHVRHQGVEVLNEYFGK
GIMKMDINSSPLMDNVSNPSGIIKKAQDLLANAYNADDAFFITNGTTSAIHAMILSTINP
GDKILLPRNIHKSVINALILTGGKPVFIQPGFDDELGISLNVAYEDIKNELKNHKDITAL
FLLNPTYYGACSDLEAIIELCHEENVLVLVDEAHGAHFPFHKDLPPPSISLGADMSAISI
HKTGGALTQASALLLNNERIESSKVLQSINMIQSTSASYLLMASIDGARSNLVLNGDVQL
SKALNLSRYAKARINKIKGIKVVTTENLGNDGVKFIDETKLCINVAKLNLTGHEVYDLLY
QEFSVQVELGDLYNILALISIGTTKEDVDKLIDSLEAISNIYKKEEKMKVIKTKQINPIQ
KLNPRDAFYKDKEMILIDECVGRISGESIMAYPPGIPIVTPGEEITKEIIDYIKLLKKNN
AYLCDMKDKNLDYILVIKN
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaagctattggagaaaagttagaagataatttttttagtgaccctatattaagtcat
aaacaaactccattacttacttctttgaaagattactctaataaagatatagcttgtttt
gatgttcctggtcatgttagacatcaaggagtagaagttttaaatgagtattttggtaag
ggtattatgaaaatggatataaattcatcgcctcttatggataatgtttcaaatccaagt
ggaattataaaaaaagctcaagatttattagcaaatgcttataacgcagacgatgctttt
ttcataacaaatggaactacatcggctatacatgctatgattttaagtactataaatcca
ggagataagatacttcttccaagaaatattcataaatcggttattaatgctttaatactt
actggtggaaaacccgtatttatacaaccgggatttgatgatgaacttggaataagttta
aatgtagcttatgaagatataaaaaatgaacttaagaatcataaagatataacagcttta
tttttactaaatccaacttactatggagcatgtagtgatttagaagctataattgagtta
tgtcatgaggaaaatgttttagttttagttgatgaagcacacggagcacattttccattt
cataaagatttaccacctccaagtataagcttaggagctgatatgtcagctataagtatt
cacaaaactggaggagcgttaactcaggcttctgcattacttttaaataatgaacgtata
gaatcaagtaaggtattgcaaagtataaatatgattcaatctacatcggcatcgtacttg
ttaatggcaagtattgatggggcaagatccaatttagtgttaaatggggatgtgcaatta
tcaaaagcacttaatttatcaagatatgcaaaagcaagaataaataaaataaaaggaatt
aaagttgttactactgagaatttaggaaatgatggagttaaatttatagatgaaactaag
ctttgcataaatgtagcaaaacttaatttaacaggtcatgaagtatatgatttgctttat
caagagttttcagttcaagtagaacttggagatttatataatatactagcacttatatct
attgggactacaaaagaggatgttgataaactgattgattctttagaagcgatatctaac
atttataaaaaagaagaaaaaatgaaagttataaaaactaagcaaataaatccaatacag
aaattaaatccaagagatgctttttataaagataaagaaatgattttaattgatgaatgt
gtaggtaggatttcaggtgaatctataatggcttatccaccaggaataccaatagtaacg
cctggagaagaaattacaaaagaaataatcgattacataaaattactaaagaaaaataat
gcatatttatgtgatatgaaagataaaaacttagattatatattagttataaaaaattaa
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