Paraclostridium sordellii: RSJ16_06665
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Entry
RSJ16_06665 CDS
T05252
Name
(GenBank) hypothetical protein
KO
K21467
penicillin-binding protein 3
Organism
psor
Paraclostridium sordellii
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psor01011
]
RSJ16_06665
Peptidoglycan biosynthesis and degradation proteins [BR:
psor01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RSJ16_06665
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
MecA_N
fn3_2
HEXIM
DUF3887
Motif
Other DBs
NCBI-ProteinID:
AUN13918
LinkDB
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Position
1309537..1311531
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AA seq
664 aa
AA seq
DB search
MKAYGKKVIIVNLLIILSVLLMVGCSSQSKVDKAFNEYVKYWENKDFEKMYSMLSSESKK
NITKENFIEEYEKTYSLVKANDLEISKVDGIGTNEDFNIKVKMNTIAGKIDSSNAKMKIT
KDNGDYKVVWNESLILPQMEKGDKVGIETDAYRGKRGTIYDRNGKVLAGEGELKQIQINM
NKFKDSDEDSSINQIANILDISSDYIKNKIDQNKNPDHAIDIVSLLPSQKEKIDSLVKIP
GVQISTIKNTRIYNGGEAIGSLIGHIGNITKEQLKENKGKDYNEYSKIGIGGIEEVYESK
LRAIDGGKVYILKPDGKKIVIAEKKAKNGEDVKLSIDLDLQQEIYKDMKGEKGASVANNP
KTGEVLAMVSSPSFDPNSYVTYITKSEKQKWEDDSNTQLERRFKNAYSPGSVMKLVTASI
GLDTKAIDPNEAIDIKGKDWDGITRVTDPGRPVNLKDATKFSDNIYFAKAALKIGGEDFV
KGAKKFGIGEDIKFGYPIQKSQISNSGNLNDKPLLAATGYGQGQVLITPLDMTMIYSTLG
NNGNIMMPKLDITKPSEPKIYQEAIKKENLPTLIDCFSAVINDEEGTGHSAKINGVNIAG
KTGTAEIKKSKDDQNGTENGWFAAVDTDQGKLAISMIIENVKDRGGSHIPTEMVKNVMEY
YFNK
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcatatggtaaaaaagttattattgtaaatttattaattatattaagtgtttta
ttaatggttggatgttcatcgcaatctaaagttgacaaagcatttaatgaatatgttaaa
tattgggaaaataaagattttgaaaaaatgtattctatgttatcatctgaatctaagaaa
aatataaccaaagaaaattttatagaggaatatgaaaaaacatatagtttagtaaaagca
aatgatttagaaatatctaaagttgatggcataggtacaaatgaagattttaacattaaa
gttaagatgaatactattgcagggaaaattgattcatctaatgcaaaaatgaaaattaca
aaagacaatggagattataaggttgtatggaatgaaagtttaatacttcctcaaatggaa
aaaggggataaagttggaattgaaactgatgcatatagaggaaaaagaggaacaatatat
gatagaaacggtaaagtactggcaggagaaggtgaattaaaacaaatacaaatcaatatg
aataaatttaaagattcagatgaagatagtagtataaatcaaatagcgaatatattggat
ataagttcagattatattaaaaataaaattgatcaaaataaaaatccagatcatgcaatt
gatattgtcagtttactaccttcacaaaaagaaaaaattgatagtttagttaagatacct
ggagttcaaatttctaccataaaaaatactagaatttataatggtggagaagctataggt
agtctaattggtcatattgggaatataacaaaagaacagcttaaagaaaataaaggaaaa
gattataatgagtatagtaaaattggtataggtggtatagaagaagtttatgaaagtaag
ttaagagctatagatggaggaaaagtatatatactaaaaccagatggtaaaaaaatagtt
atagcagagaaaaaagctaaaaatggggaagatgtaaaattatcaatagatttagactta
caacaagaaatatataaagacatgaaaggtgaaaaaggagctagtgttgcaaataatcca
aaaacaggagaagttttagctatggtaagttcgccatcatttgatccaaatagttacgtt
acttatataactaagagtgaaaagcaaaaatgggaagatgattcaaatactcaacttgaa
agaagatttaaaaatgcatattcaccaggatctgttatgaagcttgttacagcatctata
ggattagatactaaagctattgatccaaatgaagctatagatataaaaggaaaagattgg
gatggaataactagagtaacagatccaggaagacctgttaatttaaaagatgcaactaag
ttttcagataatatatactttgcaaaggctgcactaaaaataggtggagaagactttgta
aaaggagctaaaaagtttggtataggtgaggatataaaatttggatatcctatacaaaaa
tctcagatatcaaatagtggaaatctaaatgataaaccattacttgcagctacaggatat
ggtcaaggccaggtattaataacacctttagatatgactatgatttattcaacactaggg
aataatggaaacataatgatgcctaagttagatataactaagcctagtgaacctaaaatt
tatcaagaagctataaaaaaagaaaatcttcctacacttatagattgcttctcggctgta
ataaatgatgaagaaggaacaggtcatagtgctaaaattaatggagttaatatagcagga
aaaactggtacagctgaaattaaaaaaagtaaagatgatcaaaatggaactgaaaatgga
tggtttgcggcggtagatactgatcaagggaaattagctatatctatgattattgaaaat
gtaaaggataggggtggaagtcacataccaactgaaatggttaaaaatgtgatggaatat
tattttaacaaataa
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