Paraclostridium sordellii: RSJ16_07180
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Entry
RSJ16_07180 CDS
T05252
Name
(GenBank) ABC transporter
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
psor
Paraclostridium sordellii
Pathway
psor02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RSJ16_07180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psor02000
]
RSJ16_07180
Transporters [BR:
psor02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RSJ16_07180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
RsgA_GTPase
SMC_N
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AUN14015
LinkDB
All DBs
Position
1416050..1418254
Genome browser
AA seq
734 aa
AA seq
DB search
MIKLIKHLRNSIGSVLLIVVLLAIQATCDLSLPDYTSDIVNVGIQQSGIENAVPKVIRES
QMNNLTLFMSKSDKDEVMKYYTLLNKGEYKDSNVDEKLYELNTKDKSVIDKLDPIMAKSM
MIASGIEQNKTQILKKITPPGVPVNKNTDVMSVLRTMPTEALDNMKSSVEEKISKMPESM
VSQSAISYVKAEYKAIGMNVDKLQTNYIFKAGAIMLGIALISMVATVAVGYLGARVAAKL
GRNLRKQVFGKVVSFSNKEMDEFSTASLITRSTNDIQQVQMLMVMLLRIVFYAPILAIGG
FIKVLNTNTSMAWIIGVAVLAILSVVLVLFGLVMPKFKSVQKLVDKVNLVTREMLTGMLV
IRAFSTEKHEEKRFDKANTDLMKTNLFVNRAMSMMMPTMMLIMNVITVVIVWNGAHSVDS
GSMQVGDMMAFIQYTMQIIMAFLMISMVSMILPRAVVSMGRIDEVISTDLVIKDKKETQS
FDENKKGIVEFKNVSFRYPNAEEDVLSNITFTAKPGQTTAFIGSTGSGKSTLINLIPRFY
DVTEGEILVDGVNVKDVTQHELREKIGYVPQKGVLFSGTINSNLRYGKKDVSEETVRKAA
EIAQASEFIDVKPKKFETEISQGGTNVSGGQKQRLSIARAIAKDPEIYIFDDSFSALDLK
TDAALRKSLNEETGDATVLIVAQRISTIINADQIVVLDQGKVVGIGTHKELLKNCEVYNE
IALSQLSKEELANG
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgattaagctgattaaacatttaagaaactcaataggttctgtgttgcttattgttgta
cttttagcaattcaagcaacatgtgatctatctttaccagattatacatctgatatagta
aatgttggtatacaacaaagcggaattgaaaatgcagttccaaaggtcataagagaaagt
caaatgaacaatcttactttgttcatgagtaaaagcgataaagatgaagtaatgaaatat
tatacattattaaacaaaggtgaatataaagatagtaatgtagatgaaaaactttatgaa
ctgaacacaaaagataaatcagtaatagataaattagaccctataatggctaaatctatg
atgattgcttctggaattgaacaaaataaaacacagatattaaaaaaaattacaccgcca
ggagtaccagtaaataaaaatacagatgttatgtctgtacttagaacaatgccaactgaa
gctttagataatatgaaatcttcagttgaagaaaaaataagtaagatgccagaaagtatg
gtaagtcaaagtgcaataagttatgtaaaagctgaatataaagctattggtatgaacgta
gataaactacaaactaattatatatttaaagctggagctataatgcttggaatagcactt
ataagtatggtagcaacagtagcagttggatacttaggagctagagtagcagcaaaactt
ggtagaaatttaagaaaacaagtatttggaaaggttgtatctttctctaacaaagagatg
gatgaattttctacagcatcactaataactcgtagtactaatgatatacaacaagtacag
atgcttatggtaatgttacttagaatagtattttatgctccaatacttgcaataggtgga
tttataaaggtattaaatacaaatacatctatggcatggataattggggtagcagttctt
gcaatactttctgtagttttagtattatttggattagttatgcctaaattcaaatctgta
caaaaacttgttgataaagttaacttagtaactcgtgaaatgttaacaggaatgttagta
ataagagcttttagtactgaaaagcatgaagaaaaaagatttgataaagctaatactgat
ttaatgaaaactaatttatttgtaaatagagcaatgtcaatgatgatgccaacaatgatg
cttataatgaacgtaataacagttgtaattgtttggaatggagctcatagtgttgactca
ggaagcatgcaagttggagatatgatggcatttatccaatatactatgcaaataataatg
gcatttttaatgatatcaatggtttctatgattttacctcgtgcagtagtttctatggga
cgtatagatgaagttatatctactgacttagtaataaaagataaaaaagaaactcaaagt
tttgatgaaaataaaaaaggtatagttgaatttaaaaatgtaagttttagatatcctaac
gcagaagaagatgttttaagtaatataacatttacggcaaaaccaggtcaaactacagct
tttattggtagtacaggatcaggaaagtcaactcttataaatttaatacctcgtttttat
gatgtaacagaaggtgaaatattagtagatggagtaaatgtaaaagatgttactcaacat
gaattaagagaaaagataggatatgttccacaaaaaggtgtattattctcaggaactata
aactctaacttaagatatggtaagaaggatgttagtgaagaaactgtaagaaaagcagca
gagatcgctcaagcaagtgaatttatagatgttaaacctaagaaatttgaaacagaaatt
tcacaaggtggtactaatgtttctgggggtcaaaagcaaagattatcaatagctagagca
atagctaaagatccagaaatatatatatttgatgatagtttttctgcacttgacttaaaa
acagatgcagcacttagaaaatcacttaatgaagaaacaggagatgctacagtacttata
gtagctcagagaataagtacaataataaatgcagatcagatagtagttttagaccaaggt
aaggttgtaggaataggaactcataaagaacttcttaaaaattgtgaagtatataatgag
atagcactatcacagctttcaaaggaggaacttgcaaatggctaa
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