Paraclostridium sordellii: RSJ16_11980
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Entry
RSJ16_11980 CDS
T05252
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
psor
Paraclostridium sordellii
Pathway
psor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RSJ16_11980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psor03400
]
RSJ16_11980
DNA repair and recombination proteins [BR:
psor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
RSJ16_11980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AUN14899
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Position
complement(2421235..2424033)
Genome browser
AA seq
932 aa
AA seq
DB search
MSIDKSKLTPMMRQYFEVKDRYRDCIMFFRLGDFYEMFFEDAIVASKTLEIALTGRECGM
EERAPMCGIPFHSSQNYISKLVENGYKVAICEQVEDVNASKGIVKRDVVRVITPGTVLEG
SLLENKKNNYLLAVYTKDNKIGISYTDISTGEVNSTHLNEDKLVEEIAKIHPTEIIANDI
KTLDKIRTIASLSNIYINENFDESYLDSKILTEYFEKDYLSSLKLDDSELISSSLCIILN
YIYNTQKQVTSNINSINIYNSQEYMVLDMFTRNNLELTATIRGNSKKGSLLHVLDKTSTA
MGGRMLRKYVEEPLVNKNRIEKRLNVIEELKEDFMLREDLIDILKNVYDIERICGKIAFE
KVTPKEMIHLKNSIEKLPKLKDTINLSSAQILKNYINNMDDLNDIYSLIDSAILEEPSIT
IKDGNIIKSEFNDELNSLRDISKNGAFMIKEIENREKEKTGVKSLKIGFNKVFGYYIEIT
KANLANAKIDDSYVRKQTLSNAERYITSELKEIEDKILNAEDKIKSLEYEIFVEIRNNIY
DNIDRIQSVAKIIANVDVFVSLATVAYINNYVKPRINEQNKLDIKNGRHPVVESIVGEEN
FVPNDTYLNQGENIINIITGPNMAGKSTYMRQTAVIALMAHIGSFVPAEYANIPILDRIF
TRVGASDDLAQGQSTFMVEMTEVSQILKNATDKSLVILDEIGRGTSTYDGISLAWSIVEY
IQANIKCKTLFATHYHELVELEDEFSDVKNYSVAVKENNDGIVFLRKIIEGGADKSYGIY
VAELAKLPEKVIYRSREILKDLEKNHIQQDLSSNKILTGEDTREAKYSDKANDSINDKLK
LDYDKLTEELERKNDEYNLNIGRLKSEINKLKRENKELKKDKNEDEVAVTQITFDNIHDD
ELTKEIKNLDILNMTPLDAMNALYKLQLKVKK
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagtatagataaaagcaaattaactcctatgatgaggcaatattttgaagttaaagat
agatatagagactgtataatgttttttagattaggtgatttttatgaaatgttctttgaa
gatgctatagttgcttcaaaaactttagaaatagctttaacaggaagagaatgtggtatg
gaggaaagggcacctatgtgtgggattccatttcattcatcacaaaattatatatcaaag
ttagttgaaaacgggtataaagttgctatatgtgaacaagttgaagatgtcaatgcatca
aaaggtatagttaaaagagatgtagtaagagtaataactccaggaactgtacttgaagga
agtttattagaaaataaaaaaaataattacttattagctgtatatacaaaagataataaa
ataggaatttcttacacggacataagtacgggagaagtaaattctacacatttaaacgaa
gataaattagtagaagaaattgctaaaattcatccaacagaaataattgcaaatgacata
aaaactttggataaaataagaactatagctagcttaagtaatatatatataaatgaaaac
tttgatgagagttatttagattcaaaaattttaactgaatattttgaaaaagattattta
tcaagtttaaaattagatgatagtgaacttataagttcaagtttatgcattattttaaac
tatatatataacactcaaaagcaagtaacatcaaatataaatagtataaatatatataat
tcgcaagagtatatggtattagatatgtttacaagaaataatttagagttaacagctaca
ataaggggtaactctaaaaagggatctttacttcatgttttagataaaacatcaacagct
atgggtggaagaatgcttagaaaatatgttgaagagcccttagtaaataaaaatagaatt
gaaaaaagattaaatgtaatagaagaattaaaagaagatttcatgttgagagaagatcta
attgatatattaaaaaatgtatatgatatagaaagaatttgcggaaagattgcatttgaa
aaagtaacaccaaaagaaatgatacatttaaaaaattcaatagaaaaacttccaaagctt
aaagatactataaatttatcaagtgcacaaatacttaaaaattatataaacaatatggac
gacttaaacgatatatactctttaattgatagtgcaatattagaagaaccatctataact
ataaaagatggaaatataataaagtcagaatttaacgatgaattaaactctttaagagat
atatctaaaaacggggctttcatgataaaggaaatagaaaatagagaaaaagagaaaact
ggagttaaatctttaaaaattggatttaataaagtttttggatattatatagaaattaca
aaagcaaatttagcaaatgctaaaatagatgatagctatgtaagaaaacaaactttaagt
aatgcagaaagatatataacttcagagttaaaggaaatagaagataagatattaaatgca
gaagataaaataaaaagcttagaatatgaaatatttgtagaaataagaaataatatatat
gataatatagatagaatacagtcagttgcaaagattatagctaatgtagatgtttttgtt
tcattagctacggttgcgtatattaataattatgtaaaaccacgtataaatgaacaaaat
aaactagatataaaaaatggacgtcatccagttgtggaaagtatagttggagaagaaaat
tttgtacctaatgatacttatttaaatcaaggtgaaaatattataaatataattacaggg
ccaaatatggcaggaaaatctacttatatgagacaaactgcagttatagctttaatggca
catataggatcttttgttcctgcagaatatgcaaatataccaatattagatagaattttt
actagggttggagctagtgatgatttagcacagggacaatcaacatttatggtagaaatg
actgaggtatcgcaaattttaaaaaatgctacagataaaagtttagtaatactagatgaa
atcggaagaggaactagtacttatgatggtataagcttagcttggtctattgttgaatat
attcaagcaaatataaaatgtaaaactttatttgcaacgcattatcatgaattagtagaa
cttgaagatgagtttagtgatgtaaaaaactattcggttgctgtaaaagagaataatgat
ggaattgtatttttaagaaaaataatagaaggtggagctgataagagttacggaatatat
gttgcggaacttgcaaagttacctgaaaaagttatatacagatctagggaaattttaaaa
gatttagaaaaaaatcatatacaacaagacctaagtagtaataaaatcttaacaggtgaa
gatactagagaagctaagtatagtgataaagcaaatgactctataaacgataaattaaaa
ttagattatgataaattaacggaagaattagaaagaaaaaatgatgagtataatttaaat
attggacgtttaaagagtgagataaataaattaaaaagagaaaataaagaacttaaaaaa
gataaaaatgaagatgaagttgctgtaactcaaattacatttgataatatacatgatgat
gagttaactaaggaaattaaaaatttagatattttaaatatgacgccgttagatgctatg
aacgctttatataaattacaactcaaagtaaaaaaataa
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