Paraclostridium sordellii: RSJ16_12130
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Entry
RSJ16_12130 CDS
T05252
Name
(GenBank) tRNA pseudouridine(38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
psor
Paraclostridium sordellii
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psor03016
]
RSJ16_12130
Enzymes [BR:
psor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RSJ16_12130
Transfer RNA biogenesis [BR:
psor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RSJ16_12130
Prokaryotic type
RSJ16_12130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AUN14928
LinkDB
All DBs
Position
complement(2454747..2455484)
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AA seq
245 aa
AA seq
DB search
MRNIKLTIQYDGSRYKGFQRLKDNENTIQGKIESVLSKMTDEKIEIIGSGRTDMGVHAYN
QIANFKTDSNLSVGQINDYLYRYLPEDIVVKKVEDVDLRFHSRYNAKKKVYLYKIYNEKH
HDVFLRKYTNHIENSLDIEMMREASKYLIGEHDFTSFASSKSKKKSNIRNIYSIDIKNNK
GLVEIFVEGNGFLYNMVRIIVGALVDVGLHKKSPEDIKKMLELKDRSHASDTAPAKGLYL
YYVGY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatattaaattaacgatacagtatgatggatcaagatataaaggatttcaaaga
cttaaagataatgaaaatacaattcaaggcaagatagaatcagtgcttagcaaaatgact
gatgaaaaaatagaaataattggctctggaagaactgatatgggagtacacgcatacaat
caaattgctaatttcaagacagattctaatttatcagtaggtcaaatcaatgattattta
tatagatatttacctgaagatattgtagttaaaaaagttgaagatgtagatttaaggttc
cattctagatacaatgcaaaaaagaaggtatatttatataaaatatataatgaaaagcat
catgatgtatttttaagaaaatatactaaccacatagaaaactctttagatattgaaatg
atgagagaagctagtaaatatttaataggagaacatgattttacaagctttgcatcatca
aagtcaaagaaaaaatccaatattagaaatatatatagtatagatataaaaaataataaa
ggattagttgaaatttttgttgagggaaatggatttttatataatatggttaggattata
gtaggtgcacttgtagatgtaggtttacataaaaaatctccagaagatataaaaaaaatg
ttagagctaaaagatagaagccatgcatcagatacagctccggcaaaaggattatattta
tattatgttggatactaa
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