Paraclostridium sordellii: RSJ16_12900
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Entry
RSJ16_12900 CDS
T05252
Name
(GenBank) ABC transporter
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
psor
Paraclostridium sordellii
Pathway
psor02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RSJ16_12900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psor02000
]
RSJ16_12900
Transporters [BR:
psor02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RSJ16_12900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
nSTAND3
MMR_HSR1
AAA
DUF87
AAA_30
AAA_23
RsgA_GTPase
AAA_24
DO-GTPase2
AAA_29
SRP54
DEAD
cobW
ABC_membrane_2
ATP_bind_1
AAA_14
AAA_16
SMC_N
ResIII
TsaE
AAA_28
Dynamin_N
Zeta_toxin
AI-2E_transport
Motif
Other DBs
NCBI-ProteinID:
AUN15071
LinkDB
All DBs
Position
complement(2611824..2613635)
Genome browser
AA seq
603 aa
AA seq
DB search
MSKNNQVSINKISTQKAKDFKGTLKRLIMYLKTYKSSITLVIIAAILSSIFSIVSPKILG
QATTKIFEGVMLKAKGQGGIDFAFIYKVLIILVILYIISSIFNYMQQYIIVSVAQKTVYD
MRQDIYNKLNRLPLNYFDTHTYGEVLSKVTNDIDNISSTLQQSMTQLITSIVTIVGVVIM
MLTISPIMTLVTVLTIPLGILFVKPIISRSQSYFIKQQNIIGNLNGHIEEVYTGHEIIKS
FNREKKSIDTFRDINIKLYENAWKAQFMSGMMMPIMNFVSNIGYVFVSVIGAVLVTKGRI
KIGDIQAFIQYTKQFSQPISQTANIANIIQSTVASAERIFELLDEKELIPDIEKSRVIKN
PRGKVVFDHVKFGYREDKILIQDMNLEVNPGQKVAIVGPTGAGKTTLINLLLRFYELNGG
KILIDDIDIRDMRRSDLRKMFGMVLQDTWLFKGTIRENIAYGKENATKEEIENVARSANA
NHFIKTLPKGYDTIINEEGSNISQGQKQLLTIARAMISDPKILILDEATSSIDTRTELNI
QKAMDEIMVGRTSFVIAHRLSTIKDADIILVMKDGNVIESGNHKELIEKGGFYSELYNSQ
FNK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaacaatcaagtctcgattaataaaatatcaactcaaaaggcaaaagatttt
aaaggaacattaaaacgattaataatgtatttaaaaacatataaatcaagtataaccctg
gtaattatagctgctatattaagttctatattttctattgtaagtcctaaaattcttgga
caagcaacaactaaaatatttgaaggagtaatgttaaaagctaaaggtcagggagggata
gactttgcatttatatataaagtacttataattttagtgattttatatataataagttca
atttttaattatatgcaacaatatataattgtttcagtggctcaaaaaactgtatatgat
atgagacaagatatatataataaacttaatagacttcctttaaactattttgatactcat
acttatggtgaggttttgagcaaagtaacaaatgatatagataatataagctcaacactt
caacaaagtatgacacagctaataacatctattgtaactatagtgggagtagtaataatg
atgctaactataagtccaattatgactttggtgacagtattaactattccattagggatt
ttatttgtgaaaccaattataagcagatctcaaagctactttataaaacaacaaaatata
attggaaatcttaatggacatattgaagaagtttacacaggacatgagattataaaatct
tttaatagggaaaaaaaatcaattgatacgtttagagatataaatattaagctttatgaa
aatgcatggaaagcacaatttatgtcaggtatgatgatgcctattatgaactttgtaagt
aatattggctatgtgtttgtatctgttataggagctgtacttgtaacaaaaggtcgtatt
aaaattggagatatccaagcatttatacaatatactaaacaatttagccagcctataagt
caaactgcaaacatagctaatataatacaatcaactgttgcttcagcagaaagaatattt
gaactactagatgaaaaagaattaattcctgatattgagaaaagtagagtgataaaaaat
cctagaggaaaagttgtatttgatcacgtaaagtttggatacagagaagataaaatttta
atacaggatatgaatttagaagttaacccgggacaaaaagttgccatagtagggcctaca
ggtgcaggaaaaacaacacttataaacttattacttagattttatgagttaaacggaggt
aaaatacttattgacgatatagatataagagatatgagaaggtctgatttaagaaaaatg
tttggtatggttttgcaagatacatggttatttaaaggaactataagagagaatatagca
tatggtaaagaaaatgctaccaaagaagagatagaaaatgtagctagatctgctaatgca
aatcacttcataaaaactttaccaaagggttatgatacaataataaatgaagaaggatct
aatatatcacaagggcaaaaacagttattgacgatagcaagagctatgatttcagatcct
aaaatattaatattagatgaagcgactagcagtatagatactaggactgaacttaatata
caaaaagccatggatgagataatggttggaagaacaagctttgtaatagcgcatagatta
tctacgataaaagatgctgatataatactagtaatgaaagatggaaatgtaatagaaagt
ggaaatcataaagaactgattgaaaaaggtggattttattcagagttatataatagtcaa
tttaataaataa
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