Paraclostridium sordellii: RSJ16_15655
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Entry
RSJ16_15655 CDS
T05252
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psor
Paraclostridium sordellii
Pathway
psor03420
Nucleotide excision repair
psor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RSJ16_15655
03430 Mismatch repair
RSJ16_15655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psor03400
]
RSJ16_15655
Enzymes [BR:
psor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RSJ16_15655
DNA repair and recombination proteins [BR:
psor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSJ16_15655
MMR (mismatch excision repair)
Other MMR factors
RSJ16_15655
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
DEAD
AAA_14
SNF2-rel_dom
PcrA_UvrD_tudor
Terminase_6N
AAA_11
DUF7971
Motif
Other DBs
NCBI-ProteinID:
AUN15586
LinkDB
All DBs
Position
complement(3157802..3159844)
Genome browser
AA seq
680 aa
AA seq
DB search
MIHINKLNENQKNAVLHINGPCMVLAGPGSGKTRVITYRILNLVLNNNINPKNILAISFT
KASSMEMKNRALSLSNDRRLNSVNYGTFHSVFFRILRFFEKYELDCILDEKNKKFAIKGI
LKNLNVENAEDEDTILGVINEISYVKNELMDKIDFDSEILTSDEFCRVYNMYEEYKESIK
KIDFDDMLIKTYNLLKQNKQILDRVRSVYRYILVDEFQDINKVQFEVIKLIARPNNNIFV
VGDEDQSIYGFRGSRPDFLLEFEDYFKGSKKYVLDINYRSKKDITDIANKLIQNNENRYE
KSIKCDREHKGIVKYINTEDAEEEAKFIAKDILSKCEDNCTNYDDFAVIYRTNIQSRALV
DAFMDMHIPFVVRDSIVTIYDHWVARDLLAYLRLGIDTTLSEDWIRIINKPFRYISKDSI
KLASEDRDFIGALINKANLHPKQVKTLNDLEIDLSYLKTLSPKNAISYIRTSLDYDRYVL
DYCSNRKIKPTGLIEILNELESSSTHFKTINEYLEHIEKVKSEIVESRNNKNSEGVIFTT
MHSAKGLEFPYVYIIGANEGTIPHEKSYDIEDDKKRKEAIEEERRLLYVGITRAQDELYI
SSPKNKYGRKVFQSRFIDEIKSPTKEDIKAIKIGDKIVHNKFGDGVIIGKDGKMIEVKFK
RGVKDLDYSICFKNGIITKD
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgatacatataaataagttaaatgaaaatcaaaaaaatgcagttttacatattaatgga
ccttgtatggttttggctggaccaggttctggaaaaacaagagttataacatatagaata
cttaatctagtacttaataataatataaatcctaaaaatatattggctataagctttacc
aaggcatcatctatggagatgaaaaatagagctcttagtttaagtaatgatcgtcgatta
aatagcgtgaattatgggacttttcattctgtattttttaggatactaagattttttgaa
aagtatgaactagattgtattttagatgaaaaaaataagaagtttgctataaaaggaatt
ttgaaaaatttaaatgttgaaaatgcagaggatgaagatacaatactcggagttataaat
gaaatatcttatgtgaagaatgaattgatggataaaattgattttgattcagaaatacta
acaagtgatgaattttgcagagtttataatatgtatgaagaatataaagaaagcataaaa
aaaattgattttgatgatatgcttataaaaacatataacttacttaagcaaaataaacaa
attttagatagagttaggtcagtatatagatatattttggtagatgagtttcaggatatt
aataaggtgcaatttgaggtcataaagttaattgcaagacctaataacaatatatttgtt
gtaggagatgaagatcaaagtatatatgggtttagagggtctaggccagatttcttactt
gaatttgaagattactttaaaggaagtaaaaaatatgtacttgatataaattatagatct
aaaaaagatattactgatattgccaataaacttatacaaaataatgaaaatagatatgaa
aagtctataaagtgtgatagagagcataaaggaattgtaaagtatataaatacagaagat
gcagaggaagaagctaaatttatagcaaaagatatattgagtaaatgtgaagataattgt
actaactatgatgattttgcagttatttatagaactaatatacagtctagagcattagtt
gatgcatttatggacatgcatataccttttgttgttagagactcgattgttactatatat
gatcactgggtagctagagacttattagcatatttaagattaggaatagatacaacatta
agtgaagattggataaggattataaataagccttttagatatatatcaaaagacagtata
aagttagcaagtgaagatagagattttattggagcattgataaataaggcgaatctgcat
cctaagcaagttaaaacattaaatgatttagaaattgatttaagttatttaaagacacta
tctcctaaaaatgctatatcttatataagaacaagtttagactatgatagatatgtatta
gactattgtagtaatagaaagataaaaccaacaggattaatagaaatattgaacgaatta
gaaagttcttctacacattttaaaactataaatgaatacttagaacatatagaaaaagta
aaatcagagattgttgaaagtagaaataataaaaattctgaaggggttatattcacaact
atgcatagtgcaaaaggattagaatttccttatgtatatataattggagctaatgaaggt
actattcctcatgaaaaatcatatgacattgaagatgataaaaagcgtaaggaagctata
gaagaagaaagaagattattatatgtaggaataacaagagcccaagatgaactatacata
agttctcctaagaataaatatggaagaaaagtatttcagtcaaggtttatagatgaaatt
aagtctcctactaaagaggatattaaagctataaaaattggagataaaatagtccacaat
aaatttggagatggagtaataataggaaaagacggtaaaatgatagaagttaaatttaaa
agaggagtaaaagatttagattattctatttgctttaaaaatggaattataactaaagat
taa
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