Paraclostridium sordellii: RSJ16_15955
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Entry
RSJ16_15955 CDS
T05252
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
psor
Paraclostridium sordellii
Pathway
psor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RSJ16_15955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psor03400
]
RSJ16_15955
Enzymes [BR:
psor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
RSJ16_15955
DNA repair and recombination proteins [BR:
psor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RSJ16_15955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Ala_racemase_N
DUF2124
Motif
Other DBs
NCBI-ProteinID:
AUN15642
LinkDB
All DBs
Position
complement(3228130..3228969)
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AA seq
279 aa
AA seq
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MIVIGPHISISKGFAKAAQTAVDIGANTFQFFSRNPRGGNSKAFDEKDIIKFQEIRKENN
FGPLLAHAPYTMNLAGAKEEVYEFGRMVIKEDIKRMDSIGIEYMCFHPGSHVGSGVEVGS
DKIANALNEAITGDENITILLETMSGKGTEIGFTFEQIKEIIDKVEHNEKLGVCLDTCHI
FSAGYDIVNNLDEVIDDFDRIIGLDKLKAVHLNDSMMPFGAKKDRHACIGEGEIGLEAII
SFITHPKLKHLPFFLETPLEDEGHKREIEMIKDIIRQVE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
gtgatagtaataggaccacatatatcgatatcaaaagggtttgcaaaagcagctcaaaca
gctgttgatataggagcaaatacttttcaattttttagtagaaatccaagaggaggaaac
tcaaaagcttttgatgaaaaagatataatcaagtttcaagagataagaaaagaaaataat
tttgggccattattagcccatgcaccatatactatgaatttggctggggctaaagaagaa
gtttatgaatttggaagaatggtaataaaagaagatataaaaagaatggattcaatcgga
atagagtatatgtgctttcatccgggaagtcatgtaggttcgggagtggaagttggaagt
gataaaattgcaaatgctttaaatgaagctataaccggagatgaaaatataactatatta
ctagagactatgtctggtaaagggactgagataggatttacatttgaacaaataaaagaa
ataatagataaggttgaacataatgaaaaactaggtgtctgcttagatacatgtcatata
ttttcagcaggttatgatatagtaaataatttagatgaagtaatagatgattttgataga
attattggattagataaattaaaagcagtacatcttaatgacagtatgatgccttttggt
gcaaaaaaagatagacatgcatgcataggagaaggagaaatagggcttgaagctataata
agttttattacacatcctaagttaaaacatttaccatttttcttagagacaccactagaa
gatgaaggtcataaaagagaaatagagatgataaaagatatcataagacaagtagaataa
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