Paraclostridium sordellii: RSJ16_16065
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Entry
RSJ16_16065 CDS
T05252
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
psor
Paraclostridium sordellii
Brite
KEGG Orthology (KO) [BR:
psor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psor03009
]
RSJ16_16065
Enzymes [BR:
psor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RSJ16_16065
Ribosome biogenesis [BR:
psor03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RSJ16_16065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_15
Methyltransf_25
Cons_hypoth95
Met_10
N6_N4_Mtase
Methyltransf_32
PCMT
FtsJ
Methyltransf_11
UPF0020
PrmA
SAM_MT
Methyltransf_12
DOT1
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
AUN15664
LinkDB
All DBs
Position
complement(3253244..3254605)
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AA seq
453 aa
AA seq
DB search
MKRRDIIEFEVDKMEFGGTSVSRLGNRDIYMKGGITGQKVKASVKKTRSGKADVKMLELL
ENSPLETETPCKHFNQCGGCSILSVPYEKQIEIKERQVMDLFLEQDIFGFNFQGIERSPK
TKEYRNKMEYTFGDEMKDGPLTLGLHKKGKHIDIITVDGCFLVDDDFIKVLTSTVEFFNE
KKLPYYRNMSHKGYLRNLVVRKGINTNEMMVNIVTSSQEDFDMTEYKEMLLNLDLKCELV
SILHTINDGLADAVNCDELRVLHGRDYIQEELLGLKFKISPFSFFQTNTKGAEELYKIAR
EFVGEHNNKVIFDLYSGTGTIGQVMAEKAKKVYGIELIEEAVEAANKNAKLNGLTNCEFI
AGDVAKTVNKLKAKPDIIIVDPPRPGVHKDAIRDIAGFNSKEIVYISCNPKTLVLDLVEF
KNYGYEVEKVKLMDMFPNTPHVETVVKLKRVRD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtgaagagaagagatattatagaatttgaagttgataagatggagtttggtggaacttct
gtaagccgtctaggaaatagagacatatatatgaaaggcggaataacgggacaaaaggta
aaagcttcagttaagaaaactagaagtggaaaagctgatgtaaaaatgttagagctatta
gaaaactcaccattagaaacagagactccatgtaaacactttaatcaatgtggaggatgt
agtattttatcagttccatatgaaaaacaaattgaaataaaagaaagacaagtgatggac
ttatttttagaacaagatatatttggatttaacttccaggggattgaaagaagtccaaaa
acaaaagaatatagaaataaaatggagtatacatttggagatgaaatgaaagatggacct
ttaactttaggtctgcataaaaaaggtaaacatattgatattataactgttgatggatgc
ttcttagttgatgatgactttataaaagtgttaacttcaacagttgaatttttcaatgaa
aaaaaacttccatactatagaaatatgagccataaaggttatttaagaaatcttgttgtt
agaaaaggtataaatactaatgaaatgatggtaaatatagttacatcatctcaagaagat
tttgatatgacagagtacaaggagatgctactaaatttagatttaaaatgtgaattagta
agtatacttcatactataaatgatggattggctgatgctgttaattgtgatgaattaaga
gttttacatggaagagattatatacaagaagaacttttaggacttaaatttaaaatatct
ccattctcgttcttccaaacaaatacaaaaggtgcagaagaattatataaaatagctaga
gagtttgttggagaacataataataaagttatatttgatttatacagtggaactgggaca
ataggtcaagtaatggctgaaaaagctaagaaagtatatggtatagagttaatagaagaa
gctgtagaagctgctaataaaaatgctaaattaaatggattaactaattgtgaatttata
gctggggatgtagctaaaacagtaaataagttaaaagctaaaccagatataataatagta
gatccaccaagacctggagttcataaggatgcgataagagatatagctggatttaattct
aaggaaatagtttatatatcatgtaatccaaaaacattagtactagatttagtagaattc
aaaaactatggatatgaggtagaaaaggttaagttaatggatatgttcccaaatacgcct
catgttgaaactgtagtaaaattaaagcgtgtaagagactag
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