KEGG   Pseudomonas sp. Os17: POS17_0086
Entry
POS17_0086        CDS       T04177                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
psos  Pseudomonas sp. Os17
Pathway
psos03030  DNA replication
psos03410  Base excision repair
psos03420  Nucleotide excision repair
psos03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psos00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    POS17_0086
   03410 Base excision repair
    POS17_0086
   03420 Nucleotide excision repair
    POS17_0086
   03440 Homologous recombination
    POS17_0086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psos03032]
    POS17_0086
   03400 DNA repair and recombination proteins [BR:psos03400]
    POS17_0086
Enzymes [BR:psos01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     POS17_0086
DNA replication proteins [BR:psos03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     POS17_0086
DNA repair and recombination proteins [BR:psos03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     POS17_0086
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     POS17_0086
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: BAQ71780
LinkDB
Position
80353..83145
AA seq 930 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDDMYAHYKANRPSMPDDMRVQIEPLHASVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMSGSSMDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDIVPTLPIRGAKTLPAKLEEHKEM
AFLSYQLATIKVDVPLDIGLDDLHLGEPDREKLVELYSLLEFKSWLDELQRDAKRVELSE
AEPAPAAAPQPPAAEQPALELQYETILDQERFAVWLEKLKNAKLIAFDTETTGIDAQQAQ
LVGLSFAVKAGEAAYIPLTHSYMGVPEQLDRDTVLLALKPLLEDPKLLKVGQHAKFDMNI
LANCAIGGDQANGITVRGIAFDTMLESYVLNSTATRHDMDSLAQKYLDHTTVSFQDIAGK
GAKQLTFDQIPLEQAGPYAAEDADITLRLHQTLFEKLTAIPSLASVLTDIEMPLVPVLAR
IERQGALVDDKLLGVQSIELGDKMVALEREAFEIAGEEFNLGSPKQLGSILYDKLGLPVL
KKTAKGQPSTAEEVLAKLAEDDYPLPRVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTS
YHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFIAPPGYKLLAADYSQIELRIMAHLS
RDEGLLNAFRNNLDVHTATAAEVFKVELKDVTSDQRRSAKAINFGLIYGMGAQKLGKDIG
VDTKTAKAYIDTYFARYPGVRQYMDRTRAQAADQGYVETIFGRRLYLPEINSNKPQERAG
AERTAINAPMQGTAADIIKKAMVAVDNWLESSQLDARVILQVHDELVLEVREDLVDQVRD
EIRGYMSGAATLDVPLLVEVGVGNNWDEAH
NT seq 2793 nt   +upstreamnt  +downstreamnt
atgagccaagcccccctcgtcctggtggacggttcttcttatctgtaccgcgcgtttcat
gcgttgccaccgctgaccacttccaaaggcctgcccacgggcgcggtcaagggcgtgctg
aacatgctcaagagtctgcgcaagcagtacccggacagcccgttcgccgtggtcttcgac
gccaagggcgggaccttccgcgacgacatgtatgcccattacaaggccaaccgtccgagc
atgcccgacgatatgcgggtgcagatcgagcccttgcacgccagtgtgatcgccctgggt
ttcccgttgctgtgtgtggaaggggtcgaggccgacgacgtgatcggcaccctggcccgc
agcagcgcggcggcggatcgtccggtggtgatctccaccggtgacaaggacatggcccag
ttggtggatgggcacattacgctggtcaacaccatgtctggtagcagcatggatgtggaa
ggcgtgaaggagaaattcggtgtcgctcccgagcagatcatcgattacctggcattgatg
ggcgactcttccgacaacatccctggggtgccgggtatcggtccgaagacggcttccggg
ctgctggtaggggtcaacggcgggctcaaggagttgtacgagcagctcgatatcgtgccg
accctgccgattcgcggggccaagaccctgccggccaagctcgaagagcacaaggaaatg
gccttcctgtcctatcagttggcaaccatcaaggtggacgtgccgctggatatcgggctc
gacgacctgcacctgggcgagccggatcgcgagaagctggtggagctctacagcctgctg
gaattcaagagctggcttgacgagttgcagcgcgacgccaagcgcgtcgagctcagtgaa
gccgagccggcgccggccgctgcgccgcagccgccggctgccgaacagccagcgcttgag
ctgcagtacgaaaccatcctcgaccaggagcgttttgccgtctggctggaaaaactgaag
aacgccaagctgattgccttcgataccgagaccaccggcatcgatgcccagcaggcgcaa
ctggtggggctgtcgtttgcggtcaaggccggggaagcggcctacatcccgttgacccac
tcctacatgggcgtgccggagcaactggaccgcgacaccgtgttgctggccctgaagccg
ttgctggaggaccccaagctgctcaaggtcggtcagcacgccaagttcgacatgaacatc
ctggccaattgcgcgattggcggcgatcaggccaatggcatcactgtgcgcggcatcgcc
ttcgacaccatgcttgagtcctacgtgctcaactccaccgccacccgccatgacatggac
agcctggcgcagaagtacctggaccacaccaccgtgagcttccaggacattgccggcaag
ggtgccaagcagctgactttcgatcagattccgctcgagcaggccggtccctacgccgct
gaagacgccgatatcaccctgcgtctgcatcagacgctcttcgaaaaactgaccgctatc
ccgagtctggccagcgtcctcaccgatatcgagatgccgctggtgccggtcctggcacgc
atcgagcgccagggcgcactggtggatgacaagctcctgggcgtgcagagcatcgagctg
ggggacaagatggtggccctggagcgcgaagccttcgagatcgccggtgaggagttcaac
ctgggttcgcccaagcaattgggcagcatcctctacgacaagcttggcctgccggtgctg
aaaaagaccgccaagggccagccttccacggctgaagaggtgctggccaagctcgccgag
gacgactatccgttgccgcgggtgctgatgcagtaccgctccatgagcaagctgaagagc
acctacaccgatcgtctgcccgagcagatcaatccgcgtaccgggcgcatccacacgtcc
tatcaccaggcggtggcttccaccggccggttgtcctccagcgatccgaacctgcagaac
attcctgtgcgcaccgccgagggccggcgcattcgccaggcttttatcgccccgcccggc
tacaagctgctggcggcggactattcgcagatcgagctgcggatcatggctcacctgtcc
cgggacgaaggcctgctcaatgccttccgcaacaacctggatgtgcacaccgccactgcg
gccgaagtgttcaaggtggagctcaaggatgtgacgtccgatcagcgtcgcagcgccaag
gccatcaacttcggcctgatctacggcatgggcgcgcagaagctgggcaaggacataggg
gtcgataccaaaacggccaaggcctatatcgacacctatttcgcccgctatccgggggtt
cgccaatacatggatcgaacccgcgcccaggcggcggatcagggctatgtcgagaccatc
ttcggtcgtcggctgtacctgccggagatcaactccaacaagccgcaggagcgagccggt
gccgagcgtaccgcgatcaacgcgccgatgcagggcacggcggcggacatcatcaagaaa
gccatggtggcggtggacaactggctggagtcttcgcagctggatgcccgggtcatcctt
caggtgcacgacgaactggtgctggaagtgcgtgaggacctggtggaccaggtgcgcgac
gagattcgtggctacatgagcggtgccgcgaccctggatgtgccgttattggtggaagtc
ggggtgggaaataactgggatgaggcccattaa

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