KEGG   Pseudomonas sp. Os17: POS17_0307
Entry
POS17_0307        CDS       T04177                                 
Name
(GenBank) sigma-54 dependent DNA-binding response regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
psos  Pseudomonas sp. Os17
Pathway
psos02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psos00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    POS17_0307
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:psos02022]
    POS17_0307
Two-component system [BR:psos02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   POS17_0307
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 AAA_2 HTH_50 FleQ HTH_8 AAA DUF6716 AAA_16 bpMoxR HTH_10
Other DBs
NCBI-ProteinID: BAQ72001
LinkDB
Position
complement(329226..330632)
AA seq 468 aa
MTRPDSLDPQLQVVLIDDDPHLRQALSQTLDLAGLKVLSLAEAQGLAPRLERDWPGVVVS
DIRMPGMDGLELLNQLHAQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLD
SVRRALDWRRLVLDNRSLRLALSDRQELSARLVGQSAPMLRLRQQIGALAATRADVLILG
ETGAGKEVVARALHDLSGRRNGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKF
EFANGGTLFLDEIESMSLDVQVKLLRLLQERVVERLGGNQQIPLDIRIIAATKEDLRLAA
DQGRFRADLYYRLNVAPLRIPPLRERGEDVLMLFQHFADEASTRHGLPLQELQPGHRALL
LRHPWPGNVRELQNAAERFALGLELALDNNEPEHGAVAAPPLISGGLSEQVEHFEKSLIA
AEMAQPHSSLRSLAEALGIPRKTLHDKLRKHGLSFADSGASQPGDESE
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgacccgtcccgacagcctcgaccctcagttgcaagtggtgttgatcgacgacgatccg
cacctgcgccaggccctgagccagaccctggacctggccgggctcaaggtgctgtccctg
gccgaggcccagggactggcgccgcgcctggagcgggactggccgggggtggtggtcagc
gacatccgcatgcccggcatggatggactggagctgctcaaccagctgcacgcccaggat
ccggaactgccggtgctgctgatcaccggacacggagatgtgcccctggcagtgcaggcg
atgcgcgccggcgcctatgactttctggaaaagcccttcgccagcgacgccctgctggac
agcgtgcgccgcgccctggactggcggcgattggtcctggacaaccgcagcctgcgcctg
gccctcagcgatcgccaggagctcagtgcgcggctggtgggccagtcggcgccgatgctg
cgcctgcgccagcagatcggcgccctggcggcgacccgcgccgatgtgctgatcctcggc
gaaaccggcgccggcaaggaagtggtggcccgcgccctgcacgacctttccgggcggcgc
aacgggccgttcgtggcgatcaatgccggagccctggccgagtcggtggtggaaagcgag
ctgttcggccatgaacccggggcctttaccggcgcgcagaagcgccgcatcggcaagttc
gaattcgccaacggcggcaccctgttcctcgatgaaatcgaaagcatgagcctggatgtc
caggtcaagctgctgcgcctgctccaggagcgggtggtcgagcgcctgggcggcaaccag
cagattcccctggatatccgcatcatcgccgccaccaaggaagacctgcgcctggccgcg
gaccagggacgctttcgcgccgacctctactaccgcctgaacgtcgcccccttgcgcatt
ccgccactgcgcgaacgcggcgaggacgtactgatgctgttccagcattttgccgacgag
gccagtacccgccacggcctgccgctccaggagctgcagcccgggcatcgtgccctgctg
ttgcgacacccttggccgggcaacgtgcgcgagctgcaaaacgccgccgagcgctttgcc
ctgggcctggaactggccctggacaacaacgaaccagaacatggcgccgtcgccgccccg
cccctgatcagtggcggcttgagcgagcaggtggagcacttcgaaaagagcctgatcgcc
gccgaaatggcccagccccacagctccctgcgaagccttgccgaagccctgggcattccg
cgcaagaccctgcacgacaagctgcgcaaacacggcctgagcttcgccgacagcggtgcc
agccagcccggcgatgagtccgaatga

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