Pseudomonas sp. Os17: POS17_0728
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Entry
POS17_0728 CDS
T04177
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
psos
Pseudomonas sp. Os17
Pathway
psos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
POS17_0728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psos03400
]
POS17_0728
Enzymes [BR:
psos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
POS17_0728
DNA repair and recombination proteins [BR:
psos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
POS17_0728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BAQ72422
LinkDB
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Position
821757..825209
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AA seq
1150 aa
AA seq
DB search
MPDASSLTPGFMVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPEEDDSGGCGIAAAIDVQLPGSFMWQLYRLVLGRDEIPPKSLLDKAPLTWRLMRLLPEL
IDEPHFEPLQRFLTHDSDLRKRYQLAERLADLFDQYQVYRADWLEDWSAGRHQLRNVRGE
AKALTPANCWQAELWRALLVDVGTEGMAQSRAGVHQRFIERINSLDQPPAGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQARKAGMPLAL
DPQTLHQHAHPLLAAWGKQGRDYINLLDSYDDPNSYRAAFRDGRIDLFSESEPRSMLQQL
QDDILELRPLNETRERWPAVDLQQDQSIRFHIAHSAQREVEILHDQLLARFSAEPELRPR
DVIVMVPDIDSYAPHIRAVFGQLERDDRRFIPFTLTDQGQRGRDPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRARFGVDEADLPTLHRWIEGAGIRWGMNAEQRAELGLPQELEQNS
WRFGLRRMLLGYAVGRSSACDGIEPYDEIGGLDAALIGPLVALLDALQMAYQQLIEPAVP
AQWGERLQQLLQLFFLAATEHDDYLLGQLEDLRETWLETCESVGLQDRLPLTVVREAWLA
GLDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSERPASVLIGQLRDHLAGGWRLVD
EQASLLDALTQEHPLQPFSARYFHDSDTLFSYAREWQVLHQAHEPAMAVQPLEPYVQDEP
LSLAQLQDFLRHPVRHFFSQRLKVFFEAMDAPLADEEPFVLDALQRYSLSDSLLEAALSD
AAHPEQALQAQAQRLQASGLLPMAGFGECLQRELMEPLPDLLQRYRQLLDLWPTPLTSAL
PVSLELQGVRVEGWLSSLHQRADGGLLAVTTIANGIGSIKTRKWHRLIKPWINHLLACAS
GYSLTTALVASDDSLLLAPLEQQQARTILGNLLLAWQAGMRQPLPVAVKTAFAWLGQSDP
DKAGAAARKTYDGDGQNSEGERRETPALARQFADYNALIADETFSGWAETLYRPLLDAPW
RSALGEEAAQ
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgcctcgtccctcacccccggttttatggtggttcacggtaaccgcctggac
gagttgcgcagtctggtggtcagctggatgcggcgttacccgctggctcccctggaaaat
gaaatcgccctggtgcagagcaatggcatagcccaatggttgaagctggccctggccgaa
gaccccgaggaggatgactccggcggctgcgggatcgccgcggcgatcgatgtgcagttg
cccggtagcttcatgtggcagctctaccgtctggtactggggcgtgatgaaatcccgccc
aaatccttgctggataaagccccgctgacctggcgtctgatgcgcctgctgccggaactg
atcgacgagccccatttcgagcccctgcaacgcttcctgacccacgacagcgatctacgt
aaacgctaccaactggctgagcgcctggcggacctgttcgaccaatatcaggtctatcga
gccgactggctggaagactggtcggcagggcgccatcaattgcgcaacgttcgcggcgaa
gccaaggccctgaccccagccaactgctggcaagccgaactgtggcgagccctgctggtg
gatgtcggcactgagggcatggcccagagtcgagccggagtccaccaacgctttatcgag
cggatcaacagcctggaccagccccccgccggcttgccatcccgggtgatcgttttcggc
atttcctcattgccggcccaagccctcgaagccttggccggactggcgcgtttcagccag
gtcctgctctgtgtgcacaacccctgccgtcaccattgggcggatatcgttgccgacaag
gatctgctgcgccaccagtacaaacgtcaggcgcgcaaagccggcatgcccctggccctg
gatccgcaaaccctgcaccagcacgcccatccgctgctggcagcctggggaaaacaggga
cgggactacatcaatctgctggacagctacgacgatcccaacagctaccgcgcggctttt
cgcgacggtcgcatcgacctgttcagcgagagcgaaccgcgctccatgctccagcagttg
caggacgacatcctcgaactgcgccccctcaacgaaacccgcgaacgctggcccgccgtc
gatttgcagcaggatcaatcgatccgttttcacattgcccacagtgcgcaacgggaagtg
gaaattctccatgaccagctactggcgcgcttcagtgccgaacccgagctgcgcccccgg
gatgtgatcgtcatggtgccggacatcgacagctacgccccgcacatccgggcggtattt
ggccagttggaacgagatgaccgccgctttatccccttcaccctcaccgaccagggccag
cgtggccgcgacccgctgctgattgccgtcgagcacctgctgaaactgccggacagccgc
tttccggtcagcgagatcctcgacctgcttgatgtgcctgcgttgcgcgcccgttttggt
gtcgacgaagccgacctgccgaccttgcatcgctggatcgagggggccggtatccgttgg
ggcatgaacgccgagcaacgggccgaactggggctgccccaggagcttgagcaaaacagc
tggcgtttcggtctgcggcgcatgctcctggggtacgccgtcggccgctcctctgcctgc
gacggcattgagccctatgacgagattggcggcctggacgcagcgctgatcggtcccttg
gtggctctgctggatgccttgcagatggcctaccagcaactcatcgaaccggcggtgccc
gcccagtggggcgagcgcctgcagcagttgctgcagctgttcttcctggccgctaccgag
cacgacgactacctgttgggccagcttgaggacctgcgggaaacctggctggaaacctgc
gaatccgtcggcctgcaagatcggttgcccctgacggtggtgcgcgaagcctggctcgcc
ggcctggatcagggccgcctgtcccagcgctttctcgccggcgccgtgaacttctgcacc
ctgatgccgatgcgtgccatccccttcaagctggtgtgtcttttgggcatgaacgacggc
gattacccgcgcgcccagccgcccctggacttcgacctgatgggcagcgactaccgtccc
ggcgaccgttcacggcgtgaggatgaccgctacctgctgctcgaagccctgctctcggcc
cgggaccagctgtacatcagttgggttggccgcagtattcgcgacaacagcgaacggccc
gcctcggtactgatcggccagctgcgcgatcatctggccggcggctggcggctggtggac
gaacaggcatcgttgctcgacgccctgacccaggagcacccgctgcagcccttcagtgcc
cgctacttccacgacagcgacacactgttcagctatgcccgggaatggcaggtcctgcac
caggcccacgagcccgccatggccgtccagccccttgaaccctatgtccaggatgaaccc
ctgagcctggctcagttgcaggactttctgcggcacccggtacggcactttttcagccag
cggctcaaggtgttcttcgaggccatggacgcgcccctggcggacgaggagcccttcgtc
ctcgatgccctgcaacgctacagcctgagcgacagtttgctggaagcggccttgagcgat
gccgcgcatccggagcaggccctgcaggcccaggcgcagcggctgcaagccagcggcctg
ctgcccatggccgggtttggcgagtgcctgcaacgtgagctcatggagccgttgccggac
ctgctgcagcgctaccggcaactgctggacctgtggccgacaccgctgaccagcgccttg
ccggtcagcctggagctccagggcgtgcgtgtggaaggctggttgagcagcctgcatcag
cgggcagatggcgggctgttggcggtgaccaccattgccaatggcatcggctcgatcaag
acccgcaaatggcaccgcctgatcaaaccctggatcaatcacctgctggcctgcgccagc
ggctactccctgaccaccgcgctggtggccagcgatgacagcctgttgctcgcgccgctg
gagcagcaacaggcgcggacgattctcggcaacctgctgctggcctggcaggcgggcatg
cgccagccgctgccggtggcggtcaagaccgcctttgcctggctcgggcagagcgatccg
gacaaagccggcgccgccgcccgcaagacttacgatggcgacggccagaacagcgagggc
gagcgccgggagactccggccctggcccggcaatttgccgattacaacgcactgatcgcc
gatgagaccttcagcggctgggccgaaacgctctatcgtcccctgctggacgccccctgg
cgttccgccctcggcgaggaggccgcgcaatga
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