Pseudomonas sp. Os17: POS17_0730
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Entry
POS17_0730 CDS
T04177
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
psos
Pseudomonas sp. Os17
Pathway
psos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
POS17_0730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psos03400
]
POS17_0730
Enzymes [BR:
psos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
POS17_0730
DNA repair and recombination proteins [BR:
psos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
POS17_0730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
AAA_11
NAT10_TcmA_helicase
SH3_13
AAA_22
Viral_helicase1
UvrD-helicase
SLFN-g3_helicase
AAA_28
AAA_16
NTPase_1
AAA_5
nSTAND3
T2SSE
AAA_25
PhoH
DEAD
Motif
Other DBs
NCBI-ProteinID:
BAQ72424
LinkDB
All DBs
Position
828895..830976
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AA seq
693 aa
AA seq
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MTPDLFDSSTETPEVPFDLAPLARAEDLLLLLERWVERGWLRSLDKAFVGFLHELDPGCD
PLVLMAAALTSHQLGHGHVCLDLFETLKEPDFALSLPPEGDSQSGAPVLPSQVLAGLEGA
QWCKVLAGSRLVALAADQGDASRQRPLVLSGKRLYLRRYWAYERRIDNALRQRLAVTEAT
PENLSQRLDGLFGVARASGPIDWQKLACALATRGAFSIITGGPGTGKTTTVVRLLALLQG
PAVEARKPLRIRLAAPTGKAAARLTESISLQVRSLSVADEVREKIPSEVTTVHRLLGNRP
GTRHFRHHAGNRLPLDVLVVDEASMIDLEMMANLLDALPIHARLVLLGDKDQLASVEAGA
VLGDLCRDAEAGWYNPQTRAWLEAVSGEHLGASGLQEDSGHQHPLAQQVVMLRHSRRFGE
GSGIGQLARWVNQQQADEARRLLAARSHADLYGLSLKGEQDRALERLLLEGHGEGPQGYR
HYLNVLRSQRPAADTPLDDRCWTEWARNVLLAFDRFQLLCAVRKGPWGVEGLNLRITQAL
FKARLIDSDQLWYEGRPVLMTRNDYGLGLMNGDIGIALKLPEAQGQEPGRQVLRVAFPRN
DGQGGVRLVLPSRLNDVETVYAMTVHKSQGSEFAHTALILPDALNPVLTKELIYTGITRA
KDWFSLIEPRAGVFEEAVRRKVKRLSGLMLELD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggatctgttcgactcctcgaccgaaacgccggaggtgccgttcgacctggcc
cccctggcccgtgccgaggacctgctgctgttgctcgagcgctgggtcgagcgcggctgg
ctgcgttccctggacaaggcctttgtcggttttctccatgaactggacccgggctgcgat
ccgctggtgctgatggccgcggccctgaccagtcaccagctggggcatgggcatgtctgc
ctggacctgttcgaaaccctcaaggagccggatttcgccctgtccctgcccccggaaggg
gattcgcaaagcggtgccccggtgctgccgtcccaggtcctggcggggctggaaggcgcc
cagtggtgcaaggtcctggccggcagtcggctggtggccctggcggcggatcagggtgat
gcgtcccgccagcggccgttggtgctgtccggcaagcgcctgtacctgcggcgctactgg
gcctatgaacggcgcatcgacaatgccctgcgtcaacgcctggcggtcaccgaggccacc
ccggaaaacctgtcccagcgcctcgacgggctgttcggtgtggcccgggccagtggcccc
atcgactggcagaaactggcctgcgccctggccacccgcggtgccttcagcatcatcacc
ggcggccccggcaccggtaagaccaccactgtggtgcgcctgctggccctgctccagggc
ccggcggtggaagcccgcaaaccgctgcgcattcgtctggcggcgcccaccggcaaggcc
gcggcgcgtctcaccgagtccatcagcttgcaggtgcgctcgctgtcggtggccgacgaa
gtgcgcgagaagatccccagtgaagtgaccacggtgcaccgtttgctgggcaatcgtccg
ggcacccggcatttccgccatcacgccggcaaccgcctgcctctggatgtgctggtggtg
gacgaagcctcgatgatcgacctggaaatgatggccaatctgctggacgccttgcccatc
catgcgcgtctggtgctgctgggggacaaggaccagttggcctcggtggaggctggggcc
gtgctcggggacctgtgccgcgatgccgaggccggctggtacaacccgcagacccgtgcc
tggctggaagcggtcagtggcgaacacctgggtgccagcggcctgcaggaggacagcggg
caccagcatcccctggcgcagcaggtggtgatgctgcgtcactcccggcgtttcggcgaa
ggcagcggcattggccagctggcgcgttgggtcaatcagcaacaggccgacgaggcccgg
cgcctgctggcggcccgcagccatgccgacctgtatggcctgagcctcaagggcgagcag
gatcgggcgctggagcgcctgctgctggaaggccatggcgagggaccgcaaggctaccgg
cattacctgaatgtgctgcgcagtcagcgtcccgccgccgacacgcctctggacgaccgg
tgttggaccgagtgggcgcgcaatgtgctgctggcctttgaccgtttccagttgctctgc
gcggtgcgcaaggggccctggggcgtcgaaggcctgaacctgcgcattacccaggcactg
ttcaaggcccggctgatcgacagcgaccagctgtggtacgaaggccgtccggtgctgatg
acccgcaacgactatggcctggggctgatgaacggcgatatcggcatcgccctgaaactg
ccggaggcgcagggccaggagccggggcgccaggtgctgcgggttgccttcccgcggaac
gatggccagggcggggtgcgcctggtgctgccgagccggctcaacgacgtggagacggtc
tatgccatgacggtgcacaagtcccagggctcggagttcgcccatacggcgctgatcctg
cccgatgccctgaacccggtgctgaccaaggagttgatctacaccggcatcactcgggcc
aaggactggttcagcctgatcgagccccgcgccggggtcttcgaagaggcggtgcggcgc
aaggtcaagcgcctcagcgggttgatgctggagctggactga
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