Pseudomonas sp. Os17: POS17_1208
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Entry
POS17_1208 CDS
T04177
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psos
Pseudomonas sp. Os17
Brite
KEGG Orthology (KO) [BR:
psos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psos03016
]
POS17_1208 (truD)
Enzymes [BR:
psos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
POS17_1208 (truD)
Transfer RNA biogenesis [BR:
psos03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
POS17_1208 (truD)
Prokaryotic type
POS17_1208 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
LacI
E3_binding
Motif
Other DBs
NCBI-ProteinID:
BAQ72902
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Position
1356239..1357297
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AA seq
352 aa
AA seq
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MNESQLLGPRAYGDALGSAVLKATAEDFQVDEVLDIPLSGEGEHLWLWVEKRGLNTEEAA
RRIAKAAGVSLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLGAAENHTLKILKATRHKR
KLQRGAHAANGFTLRLTELTADHAAIDERLRQIAQHGIPNYFGAQRFGHDGGNLVDARSW
AARQALPEQRNVRSRLLSTARSYLFNQVLAARVADGSWQQAQVGDLLAFTDSRSFFMAGP
DECSDPRLAILDLHPTGPLWGEGASPASGVSYELEQQIAGREAALCDWLIRAGMSHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATALVRELVDLVPVGQTDSSCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaatcgcaactgttgggcccgcgggcctatggtgacgccctgggcagcgcggtg
ctcaaggccactgccgaagatttccaagtcgatgaagtgctcgatatcccgctgagcggt
gaaggcgagcacctgtggctgtgggtggaaaagcgtggcctgaataccgaagaggccgcg
cggcggattgccaaggccgccggagtatcgttgcgcaccgtcagctacgccgggctcaag
gatcgccaggcgctgactcgccaatggttcagcgtgcaactgccgggcaaggctgacccg
gatcttggcgctgcggaaaaccacaccctgaaaatcctcaaggctacccgccacaagcgc
aagctgcagcgcggtgcccatgcggccaacggttttaccctgcgcctgacagagctcacg
gcggatcatgcggccatcgatgagcgtttgcgccagatcgcccagcacgggattcccaac
tattttggcgcccagcggtttggccacgacggcggcaacctggtggatgcccgtagctgg
gccgcgcgccaggccttgccagagcagcgcaatgtgcgttcgcgcctgctttccacggcc
cgcagctatctgttcaatcaggtgctggcggcacgggtggcagacggcagctggcagcag
gcgcaagtcggtgacctgctggcgtttaccgacagtcgcagttttttcatggccgggcct
gacgagtgctcggacccgcgcctggcgattctcgacctgcaccccaccggtccgttgtgg
ggcgagggcgcctctccggcgagcggtgtgtcctacgagcttgagcaacagattgccggc
cgtgaggcggcactgtgtgattggctgatcagagccggcatgagccacgaacgacgcatc
ctgcggctgcccattggcggtttgacgtggcattatcccgagcctgacattctgcaactg
gaattcgtcctgccggccgggtgtttcgccaccgcattggtgcgtgaactcgtcgatctg
gtgccggtggggcagacggacagctcatgcgtattctga
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