KEGG   Pseudomonas sp. Os17: POS17_2193
Entry
POS17_2193        CDS       T04177                                 
Name
(GenBank) clpB protein
  KO
K11907  type VI secretion system protein VasG
Organism
psos  Pseudomonas sp. Os17
Pathway
psos02025  Biofilm formation - Pseudomonas aeruginosa
psos03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:psos00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    POS17_2193
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    POS17_2193
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psos02044]
    POS17_2193
Secretion system [BR:psos02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   POS17_2193
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_22 AAA_16 NACHT nSTAND3 TniB AAA_7 Clp_N Sigma54_activat AAA_25 ATPase_2 NBD_SMAX1 AAA_24 HMMR_N Hpr_kinase_C SLFN-g3_helicase
Other DBs
NCBI-ProteinID: BAQ73887
LinkDB
Position
2406634..2409270
AA seq 878 aa
MINVDLQQLIQALDADTRRDLERCAERCVARGGSKILVEDLLLELLERPQGLLARALQDA
GIEAAELVAVLQPGTEHSASRNPVFAPELVQWLQDALLVASLELGQTQVQQAALLLALLR
NPLRYAGSRYQPLLARLNSQRLKDFALAQQGDPGAPGQPLAGGESLLQRFTHNLTQQARD
GRLDPVLCRDEALRQMVDILARRRKNNPIIVGEAGVGKTAVVEGLASRIAAGEVPQALQG
VELLVLDMGLLQAGASVKGEFERRLKGVIDEVKAAPQPIIVFIDEAHTLIGAGGNAGGGD
AANLLKPALARGELRTIAATTWSEYKKYFEKDPALARRFQPVQLHEPSVDEAVTILRGLA
PIYEKSHGIYLRDDAVVAAAQLSARYLAGRQLPDKAVDVLDTACARVRISLAAAPQSLER
LRAELAEGARQRQALRRDAEAGLDIDQEALQRLEQRLQDAEREQLALEQRWIEQRQQAER
LLALRQELAQAREALVATSEDRQAPADDARDSEPQAHLQALQAELVAVHGALSNAQAEER
LVSFEVCPRLVAQVISAWTGVPQEQLAREHNARVASFADDLRARIRGQEQAVQALDRCMR
AVAAGLNQPDAPVGVFLLVGPSGVGKTETALALADLLYGGERFLTTINMSEFQEKHSLSR
LIGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGLANDGEGR
AIDFRNTLILMTSNLASERIDALCQGSQRPSTEDLERAIRPVLSAHFKPALLARMRVVPF
YPVDAAVLRELIEIKLQRLGQRLARRHLQFSHCQQLVTQLARRCGQSDSGARLIDHLLEA
HLLPRVADRLLQAMASGESLVQVHATVDGDGGVVCEFA
NT seq 2637 nt   +upstreamnt  +downstreamnt
atgatcaacgtcgatttgcaacaactgatccaggcactggatgccgatacccgccgcgac
ctggagcgctgcgccgagcgttgcgtggcccgtggcggcagcaagatcctggtggaggac
ctgctgctggaactgctggagcggccccaggggctgctcgcccgggccctgcaggatgcc
gggatcgaggccgccgagctggtggcggtgctgcaaccgggtaccgagcacagcgcttca
cgcaacccggtgtttgcgccggagctggtgcaatggctgcaggatgccttgctggtggcc
agcctggaactgggacagacccaggtgcagcaggcggcgttgctcctggccttgctgcgc
aacccgctgcgctatgccggcagccgctaccagccgttgctggcgcggctcaacagccag
cgcctgaaggacttcgccctggcccagcagggggatcccggggccccgggccagccgctg
gccggcggcgaatcgctgttgcagcgctttacccataacctcacccagcaggcccgggac
ggccggctcgacccggtactgtgccgcgatgaagcgctgcgccagatggtggatatcctc
gcccggcggcgcaagaacaacccgatcattgtcggcgaagccggggtcggcaagaccgcg
gtggtggaggggctggcgtcgcgcattgccgccggtgaagtgccccaggcgttgcagggc
gtcgagttgctggtcctggacatgggcttgctgcaggccggggccagcgtcaagggcgag
ttcgagcgccggctcaaaggggtgatcgatgaggtcaaggccgcgcctcagccgatcatc
gtgttcatcgacgaggcccataccctgatcggggccggtggcaacgccggcggtggcgac
gccgccaacctgctcaagccggccctggcccggggcgagctgcgcaccatcgccgccacc
acctggagcgagtacaagaaatacttcgaaaaggacccggccctggcccggcgtttccag
ccggtgcagttgcatgaacccagcgtcgacgaggcggtgaccatcctgcgcggcctggcc
ccgatctatgaaaagagccacggcatttacctgcgcgatgacgcggttgtggcggcagcg
cagttgtcggcccgctacctggcgggtcggcagttgccggacaaggctgtcgacgtcctg
gataccgcctgcgcccgggtgcgcatcagcctcgccgcggcgccgcaaagcctggaacgc
ttgcgcgccgaactggcggaaggcgctcgccagcgccaggccctgcgccgcgatgccgag
gccgggctggacatcgaccaagaggctttgcagcgtctggagcaacgcttgcaggatgcc
gagcgcgagcaactggccctggagcagcgctggatcgagcagcgccagcaggccgagcgc
ctgctcgccctgcgccaggagttggcccaggcgcgggaagcgctggtggccacttccgag
gaccggcaagcgccggctgacgatgctcgggacagcgagccgcaggcgcacctgcaggcg
ttgcaggccgaactggtggcggtccacggcgcgctcagcaacgcccaggccgaggagcgc
ctggtgagtttcgaggtgtgcccgcggttggtggcgcaagtgatcagcgcctggaccggt
gtgccccaggagcaactggcccgggagcacaacgcccgggtcgccagtttcgccgacgat
ctgcgggcgcggatccgcggccaggaacaggcggtgcaggccctcgaccgttgcatgcgc
gcggtcgccgcgggcctgaaccagcccgacgcgccggtgggggtgttcctgctggtgggc
cccagcggtgtcggcaagaccgaaaccgccctggccctggcggacctgctgtacggcggc
gagcgcttcctgaccaccatcaacatgtccgagtttcaggagaaacacagcctctcgcgg
ctgatcggcgcgccgccgggttacgtcggttacggcgagggcggcatgctcaccgaagcg
gtacgccagaaaccctattcggtggtgctgctggacgaggtggagaaggccgatccggac
gtgctcaacctgttctaccagatcttcgacaagggcctggccaacgatggcgaagggcgc
gcgatcgattttcgcaacaccctgatcctgatgacctcgaacctcgccagcgaacgcatc
gacgccctgtgccagggctcgcagcgtcccagcactgaggacctggagcgggcgatccgc
ccggtcctcagcgcccacttcaagccggcgctgctggcccgcatgcgggtggtgccgttc
tacccggtggacgctgcggtgctgcgggaactgatcgagatcaagctgcagcgcctgggc
cagcgcctggcgcgccggcacttgcagttcagccattgccagcagttggtgacgcaactg
gcccggcgctgcgggcagagcgacagcggtgcacggctgatcgatcacctgctggaagcg
catctgctgccccgggtggccgatcgtttgctgcaggccatggccagcggcgagtccctc
gtgcaggtgcacgccacggtggatggcgacggcggcgtggtctgcgagtttgcttga

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