Pseudomonas sp. Os17: POS17_2289
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Entry
POS17_2289 CDS
T04177
Symbol
rtcR
Name
(GenBank) Fis family transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
psos
Pseudomonas sp. Os17
Brite
KEGG Orthology (KO) [BR:
psos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psos03000
]
POS17_2289 (rtcR)
Transcription factors [BR:
psos03000
]
Prokaryotic type
Other transcription factors
Others
POS17_2289 (rtcR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA
AAA_5
AAA_lid_14
AAA_22
NACHT
AAA_16
ABC_tran
AAA_2
AAA_30
AAA_19
BrxC_BrxD
IstB_IS21
AAA_7
ATPase_2
AAA_14
TniB
MCM
AAA_33
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BAQ73983
LinkDB
All DBs
Position
complement(2514579..2516171)
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AA seq
530 aa
AA seq
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MSSKPTVAIGFIGSTLDRVGKGANRWSHWRPTVGLCQQQDVLIQRLELIHGLDARDVSLA
ERVANDVRQVSPETEVRLHPMGLNNPWDFEEVYAALHDFTSAYPFDTEREDYLVHITTGT
HVAQICWFLLTEARYLPARLIQTSPARRRDPSEHATGTHALIDLDLSRYDRIASRFAHRR
LEGLAFLKSGIATRNPAFNRSIEQIERVAVRSKAPMLLIGPTGAGKSFLARRIYELKRGR
HQVQGRFVEVNCATLRGDGAMSALFGHIKGAFTGAQNAREGLLRAAHSGMLFLDEIGELG
LDEQAMLLKAIEEKRFFPMGADQEVQSDFLIIAGTHRDLRDRVAQGLFREDLYARINLWT
FNLPGLAGRREDIEPNIDFELERHAREQGQLVRFNLEARRRYLAFASSSEAAWLGNFREL
SASITRMATLADSGRIDQAQVEEEIQRLRHAWGLENAEDELQQLLGAEVELDLFDRLQLK
AVIAECRRADSLSDAGRRLFGVSRQGKANPNDADRLRKYLARFGLDWKQL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaagcccacggtcgccatcggttttatcggttccaccctcgatcgcgtcggc
aagggcgccaatcgctggagccattggcggcccacggtcggtctgtgccagcagcaggac
gtgctgatccagcgcctggaactgatccacggcctggacgcccgggatgtcagcctggcc
gaacgggtggccaacgacgtgcgccaggtgtcgccggaaaccgaagtgcgcctgcacccc
atgggcctgaacaacccctgggacttcgaggaggtctacgccgccctgcacgacttcacc
agcgcctacccgttcgacaccgagcgcgaggattacctggtgcacatcaccactggcacc
cacgtggcgcagatctgctggttcctgctgaccgaggcgcgctacctccctgcccgactg
atccagacctcgccggcccggcgccgcgaccccagcgaacacgccaccggcacccacgcg
ctgatcgacctcgacttgtcgcgctacgaccgcatcgcctcgcgttttgcccacaggcgc
ctggaaggcctggctttcctcaagtccgggatcgccacccgcaacccggcgttcaaccgc
tccatcgagcagatcgaacgggtcgcggtgcgctccaaggcaccgatgctgctgatcggc
cccaccggtgccggcaagtcgttcctggcccggcgcatctatgaactcaagcgtgggcgg
catcaggtgcaggggcgttttgtcgaggtcaactgcgccaccctgcgcggcgacggtgcc
atgtcggcgctgttcgggcatatcaagggcgccttcaccggcgcccagaacgcccgggag
ggcctgctgcgggcggcccacagcggcatgctgtttcttgatgaaatcggcgagctgggg
ctggacgaacaagcgatgctgctcaaggccatcgaggaaaaacgcttcttccccatgggc
gcggaccaggaggtgcagagcgacttcctgatcatcgccggcacccaccgcgacctgcgc
gaccgggtggcccagggcctgttccgcgaagacctgtatgcgcggatcaacctctggacc
ttcaacctgccggggctggccgggcgccgcgaagacatcgagccgaacatcgacttcgag
ctggagcgccacgcccgggagcaagggcaactggtgcgtttcaacctggaggcgcggcgc
cgctacctggccttcgccagctccagcgaagcggcgtggctgggcaacttccgcgagctg
tcggcatccatcacccgcatggccaccctggccgacagcggacgcatcgaccaggcccag
gtcgaagaggaaatccagcgcctgcgccacgcctggggcctggaaaatgccgaggatgaa
ctgcagcaactgttgggcgccgaggtagagctggacctgttcgaccgcctgcagctcaag
gcggtgattgccgaatgccgtcgcgccgacagcctctcggacgccgggcgtcggctgttc
ggcgtatcgcgccagggcaaggccaaccccaacgacgccgaccgcctgcgcaaatacctg
gcgcgcttcggcctggactggaagcagctgtag
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