Pseudomonas sp. Os17: POS17_2291
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Entry
POS17_2291 CDS
T04177
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
psos
Pseudomonas sp. Os17
Brite
KEGG Orthology (KO) [BR:
psos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psos03016
]
POS17_2291
Enzymes [BR:
psos01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
POS17_2291
Transfer RNA biogenesis [BR:
psos03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
POS17_2291
Prokaryotic type
tRNA splicing ligases
POS17_2291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
BAQ73985
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All DBs
Position
2518692..2519918
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AA seq
408 aa
AA seq
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MEHKTYQLLEVANGKPIKMWTQGVPVENEARQQLMNTAKMPFIFKHLAVMPDVHLGKGST
IGSVIPTVGAIIPAAVGVDIGCGMIAARTSLTASDLPDNLAGLRSAIEAAVPHGRTSPRS
GRDKGAWGDVPQQTDQAWAALHPRFKAITDKYPALANSNNRQHLGTLGGGNHFIEVCLDE
ANRVWFMLHSGSRGVGNAIGNLFIHLAQADMRQHIANLPDRDLAYFEEGSQHFDDYVEAV
AWAQDFARQNRELMMQLVIQATRKVISKPFEVALEAVNCHHNYVQKERHFGEEVLVTRKG
AVSAKKGELGIIPGSMGAKSFIVRGLGNEEAFCSCSHGAGRTMSRTKAKNTFTLADQIRA
TAHVECRKDEAVIDEIPMAYKDIDQVMHAQRELVEVLHTLRQVVCVKG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaacacaaaacctaccaactgctggaagtggccaacggcaagccgatcaagatgtgg
acccagggcgtgcccgtggaaaacgaagcccgccagcaattgatgaacaccgcgaagatg
ccgttcatcttcaagcacctggcagtgatgcccgacgtgcacctgggtaaggggtcgacc
atcggtagcgtgatccccaccgtaggcgcgatcatcccggccgcggtcggggtggatatt
ggttgcggaatgatcgccgcccgtacttcgctgaccgcctcggacctgccggataacctg
gccggattgcgtagcgccatcgaggccgcggtgcctcacggtcgtacttcgccccgtagc
ggtcgcgataagggcgcctggggtgatgtgccgcagcagaccgaccaggcctgggctgcg
ctgcacccgcgcttcaaggcgatcaccgataagtacccggccctggccaacagcaacaac
cgccagcacctgggaaccctcggcggcggtaaccacttcatcgaggtttgcctggatgaa
gccaaccgggtctggttcatgctgcacagcggttcccgtggcgtaggtaacgccatcggc
aacctgttcattcatctggcacaggccgatatgcgtcaacatatcgccaacctgccggat
cgtgacctggcctacttcgaggaaggcagccaacacttcgacgattacgtggaagccgtg
gcctgggcccaggatttcgcccggcagaaccgtgagctgatgatgcaactggtgatccag
gccacccgcaaggtgatcagcaagcccttcgaggtggcgctggaggccgtcaactgccac
cacaactacgtgcagaaggagcgccacttcggtgaagaggtgctggtgacccgcaagggc
gcggtgtcggcgaagaagggcgagctggggatcattccggggtcgatgggggccaagagc
ttcatcgttcgcgggctgggtaacgaggaggcgttctgctcctgcagccacggcgcgggg
cgtaccatgagccgcaccaaggccaagaacaccttcaccctggccgaccagatccgcgcg
accgctcatgtggagtgccgtaaggacgaagcggtgatcgacgaaatcccgatggcctac
aaggacatcgaccaagtgatgcacgcccagcgcgagctggtggaagtgctgcacaccctg
cgtcaggtggtgtgcgttaaggggtag
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