Pseudomonas sp. Os17: POS17_3320
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Entry
POS17_3320 CDS
T04177
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psos
Pseudomonas sp. Os17
Brite
KEGG Orthology (KO) [BR:
psos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psos03400
]
POS17_3320
DNA repair and recombination proteins [BR:
psos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
POS17_3320
Archaeal homologous recombinant proteins
POS17_3320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_21
AAA_29
SMC_N
ABC_tran
nSTAND3
MMR_HSR1
cobW
AAA_22
AAA_25
RsgA_GTPase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BAQ75014
UniProt:
A0A0D6BJT8
LinkDB
All DBs
Position
3770311..3773955
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNIGRETKVPEVDSEILTSDPRTLLRRGSGSGYAEVDFVGIDGRRYRARWEANRARDKA
NGKLQASRQNLTDLDSEQLLSNQSKSEYKQLIEARLGLNFEQFTRAVMLAQSEFSAFLKA
DDKERSELLEKLTNTSIYSQLGRRAYSKSKEAEEVHKELKAQASGITPLDPEARAELDQQ
FDAARQQLKEQQARLKQLEAQHSWLKELGQWQQARQDAAEQLQQAEQQALALAPERLRLQ
RLEQLAPQRHQFLRQIELHQALEPLGQQIEQQAAQQVELQQRHQQLQQHVLDADSALTQA
QSQHSDSAPLLREAFAEQANLSRLGQSLSEAGETRDRAQSVSAQGQQSIAQLLEKQRLVG
ERLERIAGQLAHSAALAPLSEAWTLYRERLQQLMLIGNRLNQGQAELPALEQRAGTAAQQ
LAEQRSHLELLYSEAGAEPQAVAEQIQLLDGLLKDNRKQQRATEELARLWAQQQELDQRG
RALQDKQQAVAAQREALNQAGLQAKAELSVAEQTLSVTQALLERQRLARSASVEELRGQL
QDDQPCPVCGSVEHPYHQPEALLQSLGRHDESEEANARQAVDRLKEQLNELRAQVQGLIA
QQKEFLQQQEQLASQQQALAPSLQAHPQSASLLDQDPARRDAWLRQQLEQLQQSITQDES
RLDALLTLQKDATRLQQQLQQAQDASQQAAQHLHKQQEQLAADQQRLEEELGSFNNLLPA
EVLEGLRRDPASTFMQLDQQVLQRIEQLRERQDEAEEQQQRQLLLDKEQDRQLTRQQQLS
DAQQQLDALSQQHQACQDRLAALLGSHPSAELWQQQLDQAVEQARSAQAKAQHEQQELQQ
QLIQLSAELKARQERLQALDSERQQLAGSIEQWRAQHPELDDSGLQQLLELDEEQVQQLR
QHLQANDKAIEQAKVLLQERQQRLQQHQAQHNGNLEAGQLAQALEGLQQQALASEQQVAE
LRARQSEDQRRQEANQALGQQIHDAYQQWQRWARLNALIGSATGDTFRKIAQAYNLDLLV
HHANAQLRQLVRRYRLKRGGSMLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLAS
MASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQ
VSRQGNGLSTLEVK
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctggccatccgcctgaagaacctggcctccctggccgggccgttcgagatc
gacttcaccgccgagcccctggccagcgccgggctgtttgccattaccgggccgaccggc
gccggcaagagcaccctgctcgacgccctgtgcctggcgctgttcggcgcggtgccgcgg
ctgaacaacatcggccgcgagaccaaggtccccgaggtcgacagcgagatcctcaccagc
gacccgcgcaccctgctgcgccggggcagcggcagcggctatgccgaggtggactttgtc
ggcattgacgggcgccgctaccgcgcccgctgggaggccaaccgcgcccgcgacaaggcc
aacggcaagctgcaggccagccggcagaacctcaccgacctggacagcgaacaactgctg
agcaaccagagcaagagcgaatacaagcagttgatcgaggcccgcctggggctcaacttc
gagcaattcacccgcgcggtgatgctggcccagagcgagttcagcgccttcctcaaggcc
gatgacaaggaacgcagcgagctgctggaaaagctcaccaacacctcgatctacagccag
ttggggcggcgcgcctacagcaagagcaaggaggccgaagaggtccacaaggaactcaag
gcccaggccagcggcatcaccccgctggaccccgaagcccgggccgagctggatcaacag
ttcgacgccgcccggcagcagctcaaggagcagcaggcccggctcaagcaactggaggcc
cagcacagctggctcaaggagctgggacagtggcagcaggcccgacaggacgccgccgag
cagttgcaacaggccgagcagcaggccctggctctggccccagagcgcctgcgcctgcag
cgtctggaacaactggcgccgcagcgccaccagttcctgcgccagatcgagctgcaccaa
gcactggagcccctgggccaacagatcgagcagcaggccgcgcaacaggttgagctgcaa
caacgtcaccaacagctgcaacagcacgtgctcgacgccgacagcgccctgacccaggcc
cagagccagcacagcgacagcgcgccgctgctgcgcgaagcctttgccgaacaggccaat
ctgagccgtcttggccagagcctgagcgaggccggcgaaacccgtgaccgcgcgcaaagc
gtcagtgcccaaggccagcaaagcattgcccaactgctggagaagcagcgtctggtgggt
gagcgcctggagcggattgccgggcagttggcgcacagcgccgccctcgcccccttgagc
gaagcctggacgctctaccgcgaacgcctgcagcaactgatgctgatcggcaaccgcctg
aatcagggccaggccgaattgccagccctggaacagcgggccggcaccgcggctcagcaa
ctggccgaacaacgttcccaccttgaattgctctacagcgaagccggtgccgaaccccag
gccgtggccgagcagatccaattgctggacggcctgctcaaggacaaccgcaagcaacaa
cgggccacggaagagctggcacggctctgggcccagcaacaggaactggaccagcgcggc
cgggccctgcaagacaagcagcaagccgtggccgcccagcgcgaggcgctgaaccaggcc
ggcctgcaagccaaggccgaactgagcgtcgccgagcagaccctgagcgtcacccaggcc
ttgctggagcgccagcgcctggcccgcagtgccagtgtcgaggagctacgcgggcagttg
caggacgaccagccctgcccggtgtgcggcagcgtcgagcacccctatcaccagcccgaa
gccctgctgcaaagcctggggcgccatgacgaaagcgaagaagccaacgcccgccaggcg
gtggacaggctcaaggaacagctcaacgaattgcgggcccaggtccagggcctgatcgcc
cagcagaaggaattcctccagcaacaggaacaactggccagccagcaacaggcgctggcc
cccagcctgcaagcccacccgcagagtgccagcctgctggaccaggacccggcgcgacgc
gatgcctggctacgccagcaactggaacagttgcaacagagcatcacccaggatgaaagc
cgcctggatgccttgctgaccctgcaaaaggacgccacgcggctccagcagcagttgcag
caagcacaagacgccagccagcaggcggcccagcatctgcacaagcagcaggagcaattg
gccgccgaccaacagcgtctcgaagaagaactgggcagcttcaacaacctgctgccggcc
gaggtgctcgaaggcctgcgccgtgatccggccagcaccttcatgcaactggaccagcag
gtgctgcaacgcatcgaacaactgcgcgagcgccaggatgaagccgaagaacagcagcag
cgccaactgctgctggacaaggaacaggaccgccaactgacccgccagcagcaactgagc
gacgctcagcagcagctcgacgccctgagccaacagcaccaggcctgccaggaccggctg
gccgccctgctggggtcgcaccctagcgccgagctctggcagcaacagctcgatcaagcc
gtggaacaggcccgcagcgcccaggccaaggcccagcacgagcagcaggagctgcagcag
caactgatccaactgagcgccgagctcaaggcccggcaagagcgtctgcaagccctggac
agcgaacgacagcaactggccggcagcatcgaacaatggcgtgcccagcatccggagctg
gacgacagcggcctgcaacagctgctggaactggacgaggaacaggtccagcaactgcgc
cagcacctgcaggccaacgacaaggccatcgaacaagccaaggtcctgctccaggagcgt
cagcaacgcctgcaacagcaccaggcccagcacaacggcaacctggaggccgggcaactg
gcccaggcccttgaagggctgcagcaacaagccctcgccagcgaacagcaggtggcggaa
ctgcgcgcccggcaaagcgaggaccagcgccgccaggaggccaatcaggccctgggccag
cagatccacgacgcctaccagcaatggcagcgctgggcccgcctgaatgccctgatcggc
tcggccaccggcgacaccttccgcaagatcgcccaggcctacaacctcgacctgctggtg
caccacgccaacgcccaactgcgccagctggtgcggcgctaccgcctcaagcgcggcggc
agcatgctcggcctgctggtgctggacaccgaaatgggcgatgaactgcgctcggtgcac
tcgctgtccggcggcgaaaccttcctggtgtccctggccctggccctggggctggcgtcc
atggcctccagcaccctgaagatcgaatcgctgttcatcgacgaaggtttcggcagcctc
gaccccgagtccctgcaactggccatggacgccctcgacggcctgcaggcccaggggcgc
aaggtcgcggtgatttcccacgtgcaggaaatgcacgaacggatcccggtgcagatccag
gtcagccgccagggcaacggcctgagcaccctggaggtgaaatga
DBGET
integrated database retrieval system