Pseudomonas sp. Os17: POS17_3853
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Entry
POS17_3853 CDS
T04177
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
psos
Pseudomonas sp. Os17
Pathway
psos03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
POS17_3853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psos03400
]
POS17_3853
DNA repair and recombination proteins [BR:
psos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
POS17_3853
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
POS17_3853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
nSTAND1
DnaJ_CXXCXGXG
AAA_29
AAA_16
RsgA_GTPase
AAA_25
AAA_21
Anti-TRAP
AAA_33
Motif
Other DBs
NCBI-ProteinID:
BAQ75547
LinkDB
All DBs
Position
complement(4322216..4324390)
Genome browser
AA seq
724 aa
AA seq
DB search
MTSSSHVPHDALASTPPSDRDGFVRVRGAREHNLKNVDVDIPRDALVVFCGVSGSGKSSL
AFSTLYAEAQRRYFESVAPYARRLIDQVGVPDVDRIDGLPPAVALQQQRGTPSTRSSVGS
VTTLSSLVRMLYSRAGSYPPGQPMLYAEDFSPNTPQGACPQCHGLGRVYAVDEASMVPDP
SLSIRQRAVAAWPLAWQGQNLRDILVTLGYDVDIPWRELPKKQREWILFTEETPTVPVYA
GLTPEQTREALKRKQEPSYMGTFSGARRYVLHTFTHTQSALMKKRVAQFMRGSPCPLCEG
KRLKREALAVTFAGLDIGELARLPLLQLAEVLRPVAAAAYLEQASADEPVLSHAQTRAAR
QQRHARGAPEHRGAPDVRHTPNLSPEKRLAAQRIAQDLLERVATLTDLGLGYLALERSTP
SLSSGELQRLRLATQLGSQLFGVIYVLDEPSAGLHPADAEALFQALQRLKAAGNSLFVVE
HDLQTLRRADWLVDVGPAAGERGGQVLYSGPPAGLAAVTASPTRAYLFAERAPARRTPRQ
PRGWLRLEGVSRNNLKDLDAAFPLGCFTAVTGVSGSGKSSLVSQALLELVGAHLGKVGGG
EEAPELDLEDDAPPSSSGRVSAGLEQIKRLVQVDQKPIGRTPRSNLATYTGLFDQVRKLF
AATPEARERGFDAGQFSFNVAKGRCPACEGEGFVSVELLFMPSVFAPCPTCQGARYHPET
LAVT
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgacttcttcgtcccatgtcccccatgacgccctggcgagcacgccaccttctgatcgc
gacggtttcgtccgggtgcgcggcgcccgcgagcacaacctgaagaatgtcgacgtggac
attccccgggatgccctggtggtgttctgcggggtgtccggctcgggcaagtcgtccctg
gcgttttccaccctgtatgccgaggcccagcggcgctatttcgagtcggtggcgccctat
gcccggcgcctgatcgatcaggtcggggtgccggatgtcgatcgcatcgacggcctgccg
ccggcggtggccctgcaacagcagcgcggcacgccgagcacgcgctcctcggtgggcagc
gtgaccaccttgtccagcttggtgcgcatgctctattcccgggccggcagctacccgccg
gggcagccgatgctctatgccgaggatttttcaccgaacaccccccagggcgcgtgtccg
cagtgccacggcctgggccgggtctatgccgtcgatgaagcgagcatggtccccgatcct
tcgctgagcatccgccagcgcgccgtggccgcctggccgctggcctggcaggggcagaac
ctgcgggacatcctggtaaccctgggctacgacgtggacattccctggcgcgaactgccg
aaaaaacagcgcgagtggattctcttcaccgaagagactcccacggtgccggtgtacgcc
gggctgaccccggagcagacccgcgaggccctcaagcgcaaacaggagccgagctacatg
ggcaccttcagcggtgcccggcgctatgtgctgcacaccttcacccacacccagagcgcg
ctgatgaaaaagcgcgtggcgcagttcatgcgcggcagcccgtgcccgctgtgcgagggc
aagcggctcaagcgcgaggccctggcggtgacctttgccgggctggatatcggcgagctg
gcgcgcttgccgttgctgcaactggccgaggtgctgcggccggtggccgccgcggcttac
ctggagcaggcctccgccgatgagccggtgctgagccacgcccagacccgcgccgcgcgc
cagcagcgccatgcccggggcgccccggagcatcgcggcgcgccggatgtgcggcacacc
cccaacctgtccccggagaaacgcctggccgcgcaacgcatcgcccaggacctgctggag
cgggtcgccaccctgaccgacctggggctgggctacctggccctggagcgcagcacgccg
agcctgtccagcggcgagttgcagcgcctgcgcctggcgacccagctgggctcgcagctg
ttcggggtgatctacgtgctggacgaaccgtcggcgggcctgcacccggcggatgccgag
gcgctgttccaggccttgcaacggctcaaggccgccggcaactcgctgttcgtggtggag
catgatctgcagaccctgcgccgtgccgactggctggtggacgtggggccggcggccggg
gagcggggcggccaggtgctgtacagcggtccgccggcggggctggcggcggtcacggct
tccccgacccgggcctatctgttcgccgagcgggccccggcccggcgcaccccgcgccag
ccccggggctggctgcgcctggagggggtcagccgcaacaacctcaaggacctggatgcc
gcgtttcccctgggttgcttcacggccgtgaccggggtgtccgggtccggcaagtccagc
ctggtgagtcaggccctgctggaactggtgggggcccatctgggcaaggtgggcggcggc
gaggaggcgccggagctggacctggaagacgacgcgccgccaagcagcagcggtcgggtc
agtgccggcctggagcagatcaagcgcctggtgcaggtggaccagaagcccatcggccgt
accccgcgctccaatctggcgacctacaccgggttgttcgatcaggtacgcaagctgttt
gccgccacccccgaggcccgggagcgcggctttgacgccgggcagttttccttcaacgtg
gccaagggccgttgcccggcctgcgagggcgaaggctttgtcagcgtcgagctgctgttc
atgcccagcgtcttcgccccatgccccacttgccagggggcccgttaccaccccgagacg
ctggccgtgacctag
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