Pseudomonas sp. Os17: POS17_4327
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Entry
POS17_4327 CDS
T04177
Name
(GenBank) DEAD-box ATP dependent DNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
psos
Pseudomonas sp. Os17
Pathway
psos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
POS17_4327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psos03019
]
POS17_4327
03009 Ribosome biogenesis [BR:
psos03009
]
POS17_4327
Enzymes [BR:
psos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
POS17_4327
Messenger RNA biogenesis [BR:
psos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
POS17_4327
Ribosome biogenesis [BR:
psos03009
]
Prokaryotic type
rRNA helicases
POS17_4327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
BscB_a-b
Motif
Other DBs
NCBI-ProteinID:
BAQ76021
LinkDB
All DBs
Position
complement(4895656..4897329)
Genome browser
AA seq
557 aa
AA seq
DB search
MTQEIGGFAALELHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAF
ALPILHRIDPSKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLK
AIRNGAQIVVATPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKAMPES
RQTVLFSATLPQSIRAIAERHLKDPKHVKIQSKTQTVTAIEQAHLLVHADQKTSAVLSLL
EVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV
ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI
ERVTGQKVAEVRLPDAQAVLDARIKKLTNSLSPLVADAEATHGELLDRLTADIGCSPRAL
AAALLRKATNGQALNLAAIEKERPLVPNSAPRGDRPERSGDRPDRGDRERRAPMPLGEGR
ARCRTALGARDGIAAKNLLGAILNEGGLAREAIGRIQVRDSFSLVELPEDGLDRLLTKLK
DTRVAGKQLKLRRYRED
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaaatcggcggcttcgccgctcttgaacttcatcccaatattgttgctgca
gtagtcgctaccggctatgaagagccttcggctattcagcagcagtcgatcccgatcatc
cttgccgggcacgatatgattggccaggcgcaaaccggtaccggtaaaaccgctgccttt
gccctgcctatcctgcaccgcattgatccgtccaagcgcgagccgcaagctctgatcctg
gccccaacccgtgagttggcgctgcaagttgcaaccgctttcgaaacctacgccaagcag
atgccgggcgtgactgttgtggccgtctacggcggtgcgccgatgggcccacaattgaaa
gcaatccggaatggcgcacagatcgttgtcgccacaccgggccgtctgtgcgaccacctg
cgtcgcgacgaaaaagtgttggccaccgtgaaccacctggttctcgacgaagccgacgaa
atgctcaagctgggcttcatggatgacctggaagtcatcttcaaggccatgcctgagtcc
cgccagaccgtactgttttcggccaccctgccgcagtcgatccgggccattgccgagcgt
cacctgaaagacccgaaacacgtcaagatccagagcaagacccagaccgtcaccgcgatc
gagcaggctcacctgctggttcacgctgaccagaagacctctgctgttctgagcctgctg
gaagttgaagacttcgacgccctgatcatgttcgtgcgcaccaagcaagcgaccctggac
ctggccagtgccctggaagccaaaggctacaaggccgctgcgctgaacggtgacattgcc
cagaaccagcgtgagcgcgtgatcgactccctcaaggatggtcgtctggacatcgttgtg
gccaccgacgtcgccgctcgtggtctggacgtaccgcgcatcacccacgtattcaacgtg
gacatgccgtacgacccggaatcctacgtgcaccgtatcggccgtaccggccgtgccggt
cgcgaaggtcgtgcgctgctgctggtgactccgcgtgagcgccgcatgctgcaagtgatc
gagcgtgtgaccggtcagaaggttgccgaagttcgcctgccggacgcccaggccgttctt
gatgcccgcatcaagaagctgaccaacagcctgtcgccactggtggccgatgccgaagcg
acccacggcgagctgctggatcgtctgaccgccgacatcggttgcagcccgcgtgctctg
gccgcggccctgctgcgcaaggccaccaacggtcaggcgctgaacctggcagccatcgag
aaagagcgtccactggtgcccaacagcgcgccacgtggtgatcgtcctgagcgttccggc
gatcgtcctgatcgtggtgatcgtgagcgtcgcgcgccaatgcctctgggcgaaggccgt
gctcgctgccgtaccgcgctgggtgcccgtgacggtatcgctgccaagaacctcttgggc
gcgatcctcaacgaaggtggcctggcccgtgaagccatcggtcgcatccaggtgcgtgac
agcttcagtctggtcgagctgccggaagacggtcttgaccgtctgctgaccaagctcaag
gacactcgcgtggctggcaagcagctgaaactgcgtcgctaccgcgaagattga
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