KEGG   Pseudomonas sp. Os17: POS17_5162
Entry
POS17_5162        CDS       T04177                                 
Name
(GenBank) helix-turn-helix motif protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
psos  Pseudomonas sp. Os17
Brite
KEGG Orthology (KO) [BR:psos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psos03000]
    POS17_5162
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:psos02048]
    POS17_5162
Transcription factors [BR:psos03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    POS17_5162
Prokaryotic defense system [BR:psos02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    POS17_5162
SSDB
Motif
Pfam: HTH_3 HTH_31
Other DBs
NCBI-ProteinID: BAQ76856
LinkDB
Position
5769882..5770253
AA seq 123 aa
MNIRPIHTDQDYRAALQSVSPLFDNEPQPGTPEGDYFDVMITLIEAYEARQFPLDLPNPI
EAIKFRMEQSGLSAADLAPAIGRTNRVYEVLNGKRALTLPMIWKLHQLFGIPAESLIKPN
KSS
NT seq 372 nt   +upstreamnt  +downstreamnt
atgaacatccgccctatccacaccgaccaggactaccgcgccgcgctgcaaagcgtctcg
cccctgttcgacaacgagccgcagcccgggacacctgaaggcgattacttcgacgtgatg
atcaccctgatcgaggcgtacgaagccaggcagtttcccctggacctgcccaacccgatc
gaggcgatcaagttccgcatggagcaatccggcttgtccgccgccgacctggcacccgcc
atcggccgcaccaaccgcgtctacgaggtgctcaacggcaagcgcgcgctgaccctgccg
atgatctggaaactgcaccaactgttcggcatcccggccgaaagcctgatcaagccgaac
aagtcgtcctga

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