Pseudomonas sp. Os17: POS17_5369
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Entry
POS17_5369 CDS
T04177
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psos
Pseudomonas sp. Os17
Pathway
psos03030
DNA replication
psos03430
Mismatch repair
psos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
POS17_5369
03430 Mismatch repair
POS17_5369
03440 Homologous recombination
POS17_5369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psos03032
]
POS17_5369
03400 DNA repair and recombination proteins [BR:
psos03400
]
POS17_5369
Enzymes [BR:
psos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
POS17_5369
DNA replication proteins [BR:
psos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
POS17_5369
DNA repair and recombination proteins [BR:
psos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
POS17_5369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BAQ77063
LinkDB
All DBs
Position
complement(5998272..5998883)
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGISPSSSCRATEIAVVMLEQGRIVERYQSLMNAGVRVPGFIEQLTGIS
NAMLRSAPSAEQVMNEVNEFVGTTPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLTQYAGLPHTGQAHRAMADAEMAANLVAHLAGELRHTHGVRELSHD
FLCKLQKVPAAKIPEHLKRQRGG
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgtattgccgtcatcgactttgaaaccaccggaatctccccgagcagcagttgc
cgggccacggaaatcgccgtggtgatgcttgagcaggggcgcatcgtcgagcgttaccag
agcctgatgaacgccggggtgcgggtgccgggcttcatcgaacagctgaccggcatcagc
aacgccatgttgcgcagcgcaccgtcggcggagcaggtgatgaacgaggtcaacgagttc
gtcggcaccacgccgttgctggcccacaacgcggcgttcgaccagaagttctgggatttc
gagctggggcggatcaagcgcacccgtttgcagaattttgcctgttcgctgttgctggcc
cgacgcctgatgccggcggcccccaaccacaagctgggcaccctgacccagtacgccggc
ctgccccacaccggccaggcgcaccgggccatggccgatgcggaaatggccgccaacctg
gtggcgcacctggcgggcgagctgcggcacacccatggcgtgcgtgagctgtcccacgac
tttctctgcaaactgcagaaagtcccggcggccaagatccccgagcacctcaagcgtcag
cgcgggggctga
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