Pseudomonas sp. Os17: POS17_5399
Help
Entry
POS17_5399 CDS
T04177
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
psos
Pseudomonas sp. Os17
Pathway
psos03030
DNA replication
psos03430
Mismatch repair
psos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
POS17_5399 (holA)
03430 Mismatch repair
POS17_5399 (holA)
03440 Homologous recombination
POS17_5399 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psos03032
]
POS17_5399 (holA)
03400 DNA repair and recombination proteins [BR:
psos03400
]
POS17_5399 (holA)
Enzymes [BR:
psos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
POS17_5399 (holA)
DNA replication proteins [BR:
psos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
POS17_5399 (holA)
DNA repair and recombination proteins [BR:
psos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
POS17_5399 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
BAQ77093
LinkDB
All DBs
Position
6029820..6030857
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLGKHLQGPLAPVYVISGDDPLLCQEAADAIRSAVRQQGFDERQVFSADASFDW
GSLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALIEYCSRPAEDTVLLISLPKLDGSA
QKTKWGKALVEGAQTQFVQIWPVDANQLPQWIRQRLSQAGLSASQDAVELIAARVEGNLL
AAAQEIEKLKLMAEGGQITVETVQAAVADSARFDVFGLVDAILNGEAAHALRMLEGLRGE
GVEPPVILWALSRELRLLANLALQFSQGVPLDKVFSQARPPVWDKRKPLMSKALQRYSAQ
RWGQLLLDAQRIDAQIKGQASGSPWSSLSRLSLLMAGQRLALPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcacccgcccaactcggcaaacacctgcaaggtcctctcgcgccggtctat
gtgatcagcggcgatgatcccctgctctgccaggaagccgccgacgccatccgctctgcc
gtacgccagcagggattcgacgagcgccaggtattcagtgccgatgccagctttgactgg
ggcagcctgctgcaagccggggccagcatgtcgctgtttgcggaaaaacgcctgctggaa
ctgcgcctgccctcgggcaagccaggagacaagggcgccgcagcgctgatcgagtactgt
tcgcgtccggccgaggacacagtgctgctgatcagcctgcccaagctcgacggcagcgca
cagaagaccaagtggggcaaggccttggtggaaggtgcccagacccagttcgtacagatc
tggccggtggacgccaaccagcttccacagtggattcgtcagcgactgtcccaagccggg
ctgtccgccagccaggacgcggtggagctgatcgccgcgcgggtcgagggcaacctgctg
gccgcggcccaggaaatcgaaaaactcaagctgatggctgaaggtggacagatcaccgtc
gaaacggtccaggccgcagtggccgacagtgcgcgtttcgatgtgttcgggctagtggat
gccattctcaacggtgaagccgcccacgccctgcgcatgctggaagggttgcgcggtgaa
ggcgtagaacctcccgtgattctctgggccctgtcccgagaactgcggctgttggccaac
ctggccctgcaattcagccagggcgtgccattggacaaggtgttcagtcaggcccgccct
ccggtctgggacaaacgcaagccgctgatgagcaaggcgctgcaacgttactctgcacag
cgctgggggcagttgctgctggatgcccagcgcatcgatgcacagatcaaggggcaggcc
agcggttcgccctggagcagcctgagccgcctgtcgctgctgatggccggccaacgcctg
gccctgccggccgagtaa
DBGET
integrated database retrieval system
