Pseudomonas sp. Os17: POS17_5926
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Entry
POS17_5926 CDS
T04177
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
psos
Pseudomonas sp. Os17
Pathway
psos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
POS17_5926 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psos03021
]
POS17_5926 (rho)
03019 Messenger RNA biogenesis [BR:
psos03019
]
POS17_5926 (rho)
Transcription machinery [BR:
psos03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
POS17_5926 (rho)
Messenger RNA biogenesis [BR:
psos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
POS17_5926 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
NACHT
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
BAQ77620
LinkDB
All DBs
Position
complement(6599376..6600635)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKPITELLELAEQMGIENMARSRKQDVIFSLLKKHAKSGEEISGDGVLEILQD
GFGFLRSSDASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN
YDRPENAKNKILFENLTPLFPTVRMKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
KAGKTIMLQNIAANITRNNPEVHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI
NKSGTRREELLTADDELQRMWILRKLLHPMDEVAAIEFLVDKLKQTKTNDEFFLSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgactgaactcaagcaaaagccgattaccgaactgctcgaattggccgaacag
atgggcatagaaaatatggcccgttcgcgcaagcaggacgtgattttctccctgctgaaa
aagcacgcgaaaagcggtgaggaaatctccggtgatggcgtgctggagatcctccaggac
ggcttcggcttcctccgctcctccgacgcctcctacctggccggcccggacgatatctac
gtctcgccaagccagatccgtcgcttcaacttgcgcaccggtgacaccatcgttggcaag
atccgccctcccaaggaaggcgagcgttacttcgcgctgctcaaggtcgataccatcaac
tacgaccgtcctgagaacgccaagaacaagattctgttcgaaaacctgacgccgctgttc
ccgaccgtgcgtatgaagatggaagccggcaacggttccaccgaagacttgaccggtcgt
gtcatcgacctgtgcgcgccgatcggcaagggccagcgtggtctgatcgttgctccgccg
aaggcgggcaagaccatcatgctgcagaacattgctgcgaacatcacgcgcaacaaccca
gaagttcatctgatcgtgctgttgatcgacgagcgtccggaagaagtgaccgagatgcag
cgcaccgtgcgcggcgaagtggtcgcctccaccttcgacgagccgccaacccgtcacgtg
caagtggccgagatggtgatcgagaaggccaagcgcctggtcgagcacaagaaggacgtg
gtgatcctgctggactccatcacccgtctggcccgcgcctacaacaccgtgatcccgagc
tccggcaaggtcctgaccggtggtgtcgatgcccacgccctggagaagccgaagcgtttc
ttcggtgctgcgcgcaacatcgaagaaggcggctcgctgaccatcatcgctaccgcgctg
gttgaaaccggctcgaagatggatgaagtgatctacgaagagttcaagggtaccggcaac
atggagctgcccctggaccgccgtattgccgagaagcgcgtattcccggccatcaacatc
aacaagtccggcacccgccgcgaagagctgctgaccgccgatgacgagctgcagcgcatg
tggatcctgcgcaagctgctgcatcccatggatgaagtggctgccatcgagttcctggtc
gacaagctgaaacagaccaagaccaacgatgagttcttcctgtcgatgaagcgcaagtaa
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