Pseudomonas sp. Os17: POS17_5969
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Entry
POS17_5969 CDS
T04177
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
psos
Pseudomonas sp. Os17
Pathway
psos00300
Lysine biosynthesis
psos00470
D-Amino acid metabolism
psos01100
Metabolic pathways
psos01110
Biosynthesis of secondary metabolites
psos01120
Microbial metabolism in diverse environments
psos01230
Biosynthesis of amino acids
Module
psos_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psos00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
POS17_5969
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
POS17_5969
Enzymes [BR:
psos01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
POS17_5969
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAQ77663
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Position
6639744..6640991
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AA seq
415 aa
AA seq
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MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYLAYAEALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGQADKIVFSGVGKTRDDMRRALEVGVH
CFNVESAEELERLQQVAAELGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIDIATAED
VYIRAAQLPNLDIVGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGECGIYLRHIDLGGGL
GVRYRDEEPPLAADYVKAVRQRLDGRDLALVFEPGRFIVANAGVLLTRVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVSAVQPRDAEPRTYDIVGPICETGDFLAKERSLALAEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQAVEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttcaactaccgcgacggtgagctgttcgcggaaggcgtagccctgtccgcc
attgccgagcgtttcggcacgccgacctacgtctattcccgagcgcatatcgaggcccag
tacctggcctatgccgaggcacttgccggcatgccacatctggtctgcttcgcggtaaag
gccaactccaacctgggcgtgttgaatgtcctggcccgcctgggcgccggtttcgacatc
gtctcccggggcgaactggagcgggtcctggccgccggtggccaggccgacaagatcgtc
ttttccggtgtcggcaagacccgtgacgacatgcgtcgcgccctggaagtcggcgtccac
tgcttcaacgtcgaatccgccgaagaactggagcgcctgcaacaggtcgccgccgagctg
ggagttcgcgcgccggtctcgctgcgggtcaaccccgacgtcgacgccggcacccacccc
tacatctccaccgggctcaaggaaaacaagttcggcatcgacattgccacggccgaggat
gtgtacatccgcgccgcgcaactgccgaacctggatatcgtcggggtcgactgccatatc
ggctcgcaactgaccaccctggaacccttcatcgacgccctcgaccgcctgctggacctg
gtggatcgccttggcgagtgcggcatctacctgcgccacatcgatctgggtggtggcctg
ggcgtgcgttatcgcgacgaagagccgccgctggccgccgactacgtcaaggcggtgcgc
cagcgcctggatggccgcgacctggccctggtgttcgaaccgggccgtttcatcgtcgcc
aacgccggcgtgctgctgacccgggtcgagtacctcaagcacaccgaacacaaggatttc
gccatcgtcgacgcggccatgaacgacctgatccgcccggcgctgtaccaggcctggatg
gacgtcagcgccgtgcaaccacgcgacgccgaaccccgtacctacgacatcgtcggcccg
atctgtgaaaccggcgacttcctcgccaaggaacgctcgctggccctggccgagggcgac
ctgctggcggtgcattccgctggcgcctatggtttcgtcatgagctcgaactacaacacc
cgcggccgtgccgctgaagtgctggtcgatggcgaccaggctgttgaagtgcgtcgccgc
gagacggtagccgagttattcgctggcgaaagcctgctgccggagtaa
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