KEGG   Pseudomonas sp. Os17: POS17_5970
Entry
POS17_5970        CDS       T04177                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
psos  Pseudomonas sp. Os17
Pathway
psos00300  Lysine biosynthesis
psos00470  D-Amino acid metabolism
psos01100  Metabolic pathways
psos01110  Biosynthesis of secondary metabolites
psos01120  Microbial metabolism in diverse environments
psos01230  Biosynthesis of amino acids
Module
psos_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:psos00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    POS17_5970 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    POS17_5970 (dapF)
Enzymes [BR:psos01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     POS17_5970 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF CntK_N
Other DBs
NCBI-ProteinID: BAQ77664
LinkDB
Position
6640996..6641826
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRNTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKRQIRVETKSGVIELDVRNDGQISVNM
GAPRLVPADIPFQAPAQANSYTLDVDGVQVELAAVSMGNPHAVLRVDDINSAPVHELGPK
IEHHPRFPARVNVGFLQVLDRQRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgttttaccaagatgcacggcctgggcaatgacttcatggttctcgacctg
gtcagccagcacgcgcatattttgcccaagcacgccaagcaatggggtgatcgcaacacc
gggatcggcttcgatcagttgctgatcgtcgaggccccgagcaacccggacgtggatttc
cgctatcggatcttcaactccgatggttccgaagtggaacagtgcggcaacggtgcccgt
tgcttcgcccgcttcgtgctggacaagcgcctgaccaccaagcgccagatccgcgtcgag
accaagagcggcgtgatcgaactggacgtgcgcaacgacggtcagatcagcgtcaacatg
ggggcgccacgcctggtgccggcggatatcccgttccaggcaccggcccaggccaacagc
tacacgctggacgtcgatggcgtccaggtcgagctggccgccgtgtccatgggcaacccg
cacgccgtgctgcgggtggatgacatcaacagcgcgccggtgcacgagctggggccgaag
atcgagcatcacccgcgcttcccggcgcgggtcaatgtcggttttctccaggtgctggac
cgtcagcgcgcgcaattgcgggtctgggaacgcggtgccggggaaacccaggcctgcggc
accggtgcctgcgcagctgcagtggccgcgatcagccaggggtggatggattcgccacta
ttgatcgacctgccaggcgggcgcctgtccatcgaatgggcaggtccaggccaaccggtg
atgatgaccggcccggcagtacgcgtatacgaaggacaggtgcgtctttaa

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