Prescottella soli: ABI214_04250
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Entry
ABI214_04250 CDS
T10552
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psow Prescottella soli
Brite
KEGG Orthology (KO) [BR:
psow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psow03016
]
ABI214_04250 (truB)
Enzymes [BR:
psow01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABI214_04250 (truB)
Transfer RNA biogenesis [BR:
psow03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABI214_04250 (truB)
Prokaryotic type
ABI214_04250 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
AAA_lid_2
Motif
Other DBs
NCBI-ProteinID:
XBK08964
LinkDB
All DBs
Position
complement(905993..906934)
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AA seq
313 aa
AA seq
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MPKSEKPSSGLVGAGLLIVDKDAGMTSHDVVSRCRKLLNTRKVGHAGTLDPMATGVLILG
VERATKLLGLLALTTKSYSATIRLGQSTTSDDAEGETLAVADASGITDEQIAAEIAHLTG
DIQQVPATVSAIKVDGKRAHAMVRAGEEVTLAARPVTVSRFDVLARRDVPGEAGGEQPGG
FVDIDVEVDCSSGTYIRALARDLGGALGVGGHLTALRRTAVGPFTLEHARTLAQLADDPD
VSLDIDQAAQTAFPHRRISADEAESLSQGRWLEPIGMKGVYAAIDPDDNTIALVQERGKR
ASSVMVVRPATLQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaagtctgagaaaccgtcctccggcctcgtcggcgccggtctgctgatcgtcgac
aaggacgccgggatgaccagccacgacgtcgtctcccggtgccggaaactgctgaacacc
cgcaaggtggggcacgccggcacgctcgacccgatggcgaccggggtgctgatcctcggc
gtggagcgggcgaccaagctgctcggtctgctggcgctgaccaccaagtcgtacagcgcc
acgatccggttgggtcagagcacgacctccgacgacgccgagggcgagaccctcgcggtg
gcggacgcgtccgggatcaccgacgagcagatcgcagccgagatcgcccacctcaccggc
gacatccaacaggtcccggccaccgtgagcgcgatcaaggtcgacggcaagcgggcgcac
gcgatggtgcgggccggcgaggaagtgacgctcgctgcccgcccggtcaccgtctcccgg
ttcgacgtcctcgcacggcgtgacgtgccgggggaagcgggcggggagcagcccgggggt
ttcgtcgacatcgacgtcgaggtcgactgctcgtcgggcacctacatccgcgcgctcgcg
cgtgacctcggcggggcgctcggtgtcggaggccatctcaccgcgctgcgccgcaccgcc
gtcgggccgttcaccctcgaacacgcccgcaccctggcgcagctcgcggacgatcccgac
gtcagcctcgacatcgaccaggccgcccagaccgcgttcccgcaccgccggatcagtgcc
gacgaggccgagtcgctcagccagggtcgctggctcgaaccgatcggcatgaagggtgtc
tacgcggcgatcgaccccgacgacaacaccatcgcgctggtgcaggaacgtggaaagcgg
gccagttcggtgatggtggtgcgcccggcgacgctgcagtag
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