Prescottella soli: ABI214_05620
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Entry
ABI214_05620 CDS
T10552
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
psow Prescottella soli
Pathway
psow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABI214_05620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psow03019
]
ABI214_05620
03009 Ribosome biogenesis [BR:
psow03009
]
ABI214_05620
Enzymes [BR:
psow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ABI214_05620
Messenger RNA biogenesis [BR:
psow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABI214_05620
Ribosome biogenesis [BR:
psow03009
]
Prokaryotic type
rRNA helicases
ABI214_05620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
UvrA_inter
HEM4
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XBK09214
LinkDB
All DBs
Position
complement(1205362..1207152)
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AA seq
596 aa
AA seq
DB search
MSDTERDPQTDDNPITFADLQIDERVLKALSDVGYESPSPIQAATIPTLLEGKDVVGLAQ
TGTGKTAAFAIPILSRLEVDRKVPQALILAPTRELALQVAEAFGKYSAHIPGLHVLPIYG
GQAYGVQLSGLRRGAQIIVGTPGRVIDHLEKGTLDLSNLEYLVLDEADEMLKMGFQDDVE
RILADTPEYKQVALFSATMPPAIRKISKQYLHDPVEITVKAKTATASNITQRWVQVAHQR
KLDALTRILEVETFEAMIIFVRTKQATEDLAERLRARGFSAAAINGDIVQAQRERTIGQL
KSGALDILVATDVAARGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRTGDALLFVAP
RERHLLKSIERTTRQPLTEMQLPTVEDVNAQRVSKFGDSITASLSSDNLALFRKLIEDYE
REHDVPLADIAAALAVQSRDGESFLMEPEPPAPPRREREPRERPARRFDESGPSGPRVGR
DGQEFATYRIAVGKRHKVVPGAIVGAIANEGGLRRSDFGHISIRPDHSLVELPANLPRET
VEALRATRISGVLIQLQPDQGAPSARPSTRGGRDDRAAGKFSRGKGDKFGKRRPRD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccgagcgcgacccgcagaccgacgacaatcccatcaccttcgccgacctt
cagatcgacgaacgggtgctgaaggccctttccgacgtcggatacgagtcgccctcgccg
atccaggccgcgaccatcccgacgctgctcgagggcaaggacgtcgtgggcctggcccag
acgggcaccggcaagacggctgcgttcgcaattccgatcctgtcccgcctcgaggtcgac
cggaaggtgcctcaggcgctgatcctggcgccgacccgtgagctcgcgctgcaggtggcc
gaggcgttcggcaagtactcggcacacatcccgggtctgcacgtgctgccgatctacggc
ggtcaggcgtacggcgtgcagctgtcgggtctgcgccgcggcgcccagatcatcgtgggc
acgcccggtcgcgtgatcgaccacctggagaagggcacgctcgacctctccaacctcgag
tatctcgtcctcgacgaggccgacgagatgctcaagatgggtttccaggacgacgtcgag
cggatcctcgccgacacgcccgagtacaagcaggtggcgctgttctcggcgaccatgccg
ccggcgatccgcaagatctccaagcagtacctgcacgatcccgtcgagatcaccgtcaag
gcgaagaccgcgacggcgtcgaacatcacccagcgctgggtgcaggttgcgcaccagcgc
aagctggacgcgctcacccggatcctcgaggtcgagaccttcgaggcgatgatcatcttc
gtccggaccaagcaggccaccgaggacctcgccgagcgcctgcgggctcgcgggttctcc
gccgccgccatcaacggcgacatcgtgcaggcgcagcgtgagcgcacgatcggccagctc
aagtcgggtgccctcgacatcctcgtcgccaccgacgtcgcggcccgtggtctggacgtc
gaccgcatctcgcacgtggtcaactacgacatcccgcacgacaccgagtcgtacgtgcac
cgcatcggtcgcaccggccgcgccgggcgcaccggtgacgcgttgctgttcgtcgccccg
cgcgagcggcacctgctcaagtcgatcgagcggaccacgcggcagccgctcaccgagatg
cagttgccgaccgtcgaggatgtcaacgcgcagcgtgtctcgaagttcggggactccatc
acggcgagcctgagctccgacaacctggcgctgttccgcaagctcatcgaggactacgag
cgcgagcacgacgttccgctcgccgacatcgccgccgcgctggcggtgcagtcgcgcgac
ggcgagtcgttcctgatggagcccgagccgccggccccgccgcgccgcgagcgcgagccg
cgggagcggccggcccgccgattcgacgagagcggtccgagtggcccgcgtgtcggtcgg
gacggccaggagttcgccacgtaccggatcgcggtcggcaagcggcacaaggtcgttccc
ggtgccatcgtcggagccatcgcgaacgagggcggcctgcgccgcagcgacttcgggcac
atcagcatccgccccgatcacagcctggtcgagctgccggcgaacctaccccgcgagacc
gtcgaggccctgcgcgcgacccggatctccggtgtgctgatccagctgcagccggaccag
ggtgcgccgtcggcgcgcccgtcgacgcgcggcggccgggacgaccgggcagccggcaag
ttcagccgcggcaaaggcgacaagttcggcaagcgtcggccgcgtgactga
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