Prescottella soli: ABI214_11215
Help
Entry
ABI214_11215 CDS
T10552
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psow Prescottella soli
Brite
KEGG Orthology (KO) [BR:
psow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psow03032
]
ABI214_11215 (topA)
03400 DNA repair and recombination proteins [BR:
psow03400
]
ABI214_11215 (topA)
Enzymes [BR:
psow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABI214_11215 (topA)
DNA replication proteins [BR:
psow03032
]
Prokaryotic type
DNA Topoisomerases
ABI214_11215 (topA)
DNA repair and recombination proteins [BR:
psow03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABI214_11215 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
XBK10243
LinkDB
All DBs
Position
complement(2383780..2386680)
Genome browser
AA seq
966 aa
AA seq
DB search
MASRDKSTADGASATRRLVIVESPTKAKKIAPYLGKNYVVEASVGHIRDLPRGAADVPAK
YKGEPWARLGVNVDHDFEPLYVVSPEKKSKVTELKSLLKDADELYLATDPDREGEAIAWH
LLETLKPKIPVRRMVFHEITEPAIRAAAEDTRDLDNDLVDAQETRRILDRLYGYEVSPVL
WKKVMPKLSAGRVQSVATRVIVQRERERMAFRSAEYWDISATLDAGADASPRAFGARLVS
VDGSRVAAGRDFGPDGKLKSSGVTVIDEAYARRLAEALEGVDLVVSSAESKPYTRKPYAP
FMTSTLQQEAARKLRFSSERTMRVAQRLYENGYITYMRTDSTTLSQSAIAAARAQATELY
GAEYVHSSPRQYTRKVKNAQEAHEAIRPAGDVFQTPGQLHSRLENDEFRLYELIWQRTVA
SQMADARGTTLTLRITGTAGTGEECTLSSSGRTITFPGFLKAYVESVDEEAGGQSDDAES
RLPVLTQGQGVTATKLDPDGHTTNPPARFTEASLIKALEDLGIGRPSTYSSIIKTILDRG
YVYKRGSALVPSWVAFAVIGLLEAHFGRLVDFDFTAAMEDDLDEIAGGREQRGNWLSSFY
FGDDKAADDTIARAGGLKKMVGENLEDIDAREINSIRLFDDAEGREVRVRVGRFGPYLER
MVQNPDDPDGDLVSQRANLPDDLPPDELTPEYTEKLFATPQEGRKLGVDPLTGHEIVAKE
GRFGPYVTEILPEPAAEPEPDIVPVEAAADGTVKTKAVKKAPAKKAAKKAAGPKPRTSSL
LKSMDLATVTLEDALRLLSLPRVVGIDPESKEEITAQNGRYGPYLKKGTDSRSLENEEQM
FTVTLEDALKIYAEPKRRGRQASAAAPLRELGNDSATGKPMVIKDGRFGPYVTDGETNAS
LRKGDEVETITDERASELLADRRARGPVKKKAAAKKAPAKKAAAKKTAAKKAPVKKAAAK
KSTAEK
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
gtggcatcacgggataagagcacggcggacggagcgtctgccacgcgccgcctcgtcatt
gtcgagtcaccgacgaaggccaagaagatcgcgccctacctcggcaagaactacgtcgtg
gaggcatcggtcggccacattcgtgacctgccgcgcggcgccgccgacgtccctgccaag
tacaagggtgagccgtgggcccgcctcggcgtgaatgtcgaccacgacttcgagccgctg
tacgtcgtcagccccgagaagaagtccaaggtcaccgagctcaagagcctgctgaaggat
gccgacgagctctacctcgccaccgaccccgaccgcgagggcgaggccatcgcgtggcat
ctcctcgagacgctcaagcccaagattccggttcgccggatggtgttccacgagatcacc
gagcccgcgatccgcgccgccgccgaggacacccgcgacctcgacaacgacctggtcgac
gcgcaggagacccgccgcatcctcgaccgcctctacggctacgaggtcagcccggtgctg
tggaagaaggtcatgccgaagctgtcggcgggccgcgtgcagtcggtcgcgacgcgcgtg
atcgtccagcgcgagcgcgagcggatggcgttccgctcggcggagtactgggacatctcg
gccacgctcgacgccggcgccgacgccagcccccgggccttcggggcgcgcctggtctcg
gtcgacggttcccgcgtcgccgccggccgcgacttcggacccgacgggaagctgaagtcc
agcggcgtcacggtgatcgacgaggcgtacgcgcggcggctcgcggaggcgctcgagggc
gtcgacctggtcgtctcctcggccgagagcaagccttacacgcgtaagccgtacgcgccg
ttcatgacgtcgactctgcagcaggaagccgcgcgcaagctgcggttctcgtcggagcgg
accatgcgcgtcgcgcagcgtctgtacgagaacggctacatcacctacatgcgaaccgac
tcgaccacgctgtcgcagtcggcgatcgcggcggcccgcgcgcaggccaccgagctgtac
ggcgccgagtacgtccactcgagcccgcgccagtacacccgcaaggtcaagaacgcgcag
gaggcgcacgaggcgatccgtcccgcgggcgatgtcttccagacccccggacagctgcac
tcgcgcctcgagaacgacgagttccggctgtacgagctcatctggcagcgcacggtcgcg
tcgcagatggccgacgcccgcggcaccacgctgacgctgcggatcaccggcaccgccggt
accggcgaggagtgcacgctctcctcgtccggccgcactatcacgttccccggcttcctc
aaggcgtacgtggagagcgtcgacgaggaggccggcggccagtccgacgacgccgagtcg
cgcctgccggtgctgacccagggccagggcgtgaccgccaccaagctcgacccggacggc
cacaccaccaacccgccggcccgcttcaccgaagccagcctgatcaaggcgctcgaagac
ctcggcatcggccgtccgtcgacgtactcgtcgatcatcaagaccatcctcgaccgcggc
tatgtctacaagcgcggcagcgcgctggtcccgtcctgggtggcgttcgcggtgatcggt
ctgctcgaggcgcacttcggtcggctcgtcgacttcgacttcaccgcagcgatggaggac
gacctcgacgagatcgccggtggccgcgagcagcgcgggaactggctgtcgagcttctac
ttcggtgacgacaaggcggccgacgacacgatcgcgcgcgccggcggcctgaagaagatg
gtcggcgagaacctcgaggacatcgacgcccgcgagatcaactcgatccgcctgttcgac
gacgccgagggccgtgaggtccgcgtgcgggtcggccgcttcggtccttatctcgagcgg
atggtccagaatcccgacgacccggacggcgacctggtctcgcagcgcgcgaacctgccc
gacgatctgccgccggacgagctcactcccgagtacacggagaagctgttcgcgacgccg
caggagggtcgcaagctgggcgtcgacccgctgaccgggcacgagatcgtcgcgaaggag
ggccgcttcggcccgtacgtcaccgagatcctgcccgagccggcagccgagcccgagccg
gacatcgttcctgtcgaggcggccgccgacggcaccgtcaagacgaaggccgtcaagaag
gctccggctaagaaggccgcgaagaaggctgccggcccgaagccgcgcaccagctcgctg
ctcaagtcgatggacctggcgaccgtcacgctcgaggacgcgttgaggctgctgtcgctg
ccgcgtgtcgtcggcatcgaccccgagtcgaaggaagagatcaccgcgcagaacggccgg
tacgggccgtatctgaagaagggcaccgactcccgttcgctggagaacgaggagcagatg
ttcacggtgacgctcgaggacgcactcaagatctacgccgagcccaagcggcgcggacgt
caggcctcggcggcggccccgcttcgtgagctcggcaacgactcggcgacgggtaagccg
atggtgatcaaggacggccgtttcggtccgtacgtcaccgacggtgaaaccaacgccagc
ctgcgcaagggcgacgaggtcgagaccatcaccgacgagcgcgcgtccgagttgctggcc
gatcgccgtgcccgcggaccggtgaagaagaaggccgcggccaagaaggctcccgcaaag
aaggcggcggcgaagaagaccgcagccaagaaggcgccggtcaagaaggccgccgcgaag
aagtcgacggccgagaagtag
DBGET
integrated database retrieval system
