Prescottella soli: ABI214_13940
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Entry
ABI214_13940 CDS
T10552
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
psow Prescottella soli
Brite
KEGG Orthology (KO) [BR:
psow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psow03032
]
ABI214_13940 (gyrB)
03400 DNA repair and recombination proteins [BR:
psow03400
]
ABI214_13940 (gyrB)
Enzymes [BR:
psow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ABI214_13940 (gyrB)
DNA replication proteins [BR:
psow03032
]
Prokaryotic type
DNA Topoisomerases
ABI214_13940 (gyrB)
DNA repair and recombination proteins [BR:
psow03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABI214_13940 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
XBK06122
LinkDB
All DBs
Position
complement(2983102..2985138)
Genome browser
AA seq
678 aa
AA seq
DB search
MAAQKSDKSNTYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEAMAG
YASRVDVTMLEDGGIQVVDDGRGIPVAMHASGAPTVEVVMTQLHAGGKFDSDAYAVSGGL
HGVGISVVNALSTKVEVDINVDGYNWSQTYDHAKPGQLEQGEPTSATGTTVRFWADPEIF
ETTTYNFETVARRLQEMAFLNKGLTITLTDERVAEDEVTDDVVSATAEAPKTATETEEEA
AAPKAPKVKSRVYHYPGGLEDYVRFINRTKQPIHNSVVGFTAKGTGHELEIAMQWNSGYS
ESVHTFANTINTHEGGTHEEGFRAALTSVVKKYAKDKKLVKDKDPELTGDDIREGLAAII
SVKVAEPQFEGQTKTKLGNTEVKSFVQKACNENIAHWFEANPADAKTIVTKAVSSAQART
AARKARELVRRKSATDIGGLPGKLADCRSNDPSKCEIYIVEGDSAGGSAKSGRDSMYQAI
LPLRGKIINVEKARIDRVLKNAEVQSIITAFGTGIHDEFDISKLRYHKIVLMADADVDGQ
HIATLLLTLLFRFMRPLVEQGHVYLAQPPLYKLKWQKGAAPEFAYSDRERDGLLEAGLSS
GKKINKDDGIQRYKGLGEMNAKELWETTMDPSVRVLRQVTLDDAAAADELFSVLMGEDVE
ARRSFITRNAKDVRFLDV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcccagaagtcagacaagagcaacacctacggcgcttcctccatcaccgtcctc
gaagggctggaggccgtccgcaagcgacccggcatgtacatcggttccaccggtgaacgc
ggcctgcaccacctgatctgggaggtcgtcgacaactcggtcgacgaggcgatggccggc
tacgcgagcagggtcgacgtcacgatgctggaggacggcggcatccaggtcgtcgacgac
ggccgcggtatccccgtcgcgatgcacgcctccggtgcccccaccgtcgaggtcgtcatg
acccagctgcacgcgggcggcaagttcgactccgacgcctacgcggtgtccggcggcctg
cacggcgtcggcatctcggtcgtcaacgcgctgtcgaccaaggtcgaggtcgacatcaac
gtcgacggctacaactggtcccagacgtacgaccacgccaagcccggccagctcgagcag
ggcgagccgacgtcggcgaccggcaccaccgtccgattctgggcggacccggagatcttc
gagaccaccacctacaacttcgagacggtcgcgcgtcgtctgcaggagatggcgttcctg
aacaagggcctgaccatcaccctcaccgacgagcgcgtcgccgaggacgaggtcaccgac
gacgtcgtcagcgccaccgcggaggcccccaagacggccaccgagacggaggaggaggcg
gccgcgccgaaggcgcccaaggtcaagtcccgcgtctaccactacccgggcggcctcgag
gactacgtgcggttcatcaaccgcaccaagcagccgatccacaactcggtcgtcggcttc
accgccaagggcaccggccacgagctcgagatcgcgatgcagtggaactccggctactcg
gagtcggtgcacacgttcgcgaacaccatcaacacccacgagggcggcacccacgaggag
ggcttccgcgcggcgctcacctcggtggtgaagaagtacgcgaaggacaagaagctcgtc
aaggacaaggatccggagctcaccggcgacgacatccgcgagggtctcgcggcgatcatc
tcggtcaaggtcgccgagccgcagttcgagggccagaccaagaccaagctcggcaacacc
gaggtcaagtcgttcgtgcagaaggcatgcaacgagaacatcgcacactggttcgaggcg
aaccccgcggatgccaagaccatcgtgaccaaggcggtgtcgtcggcgcaggcgcgtacc
gccgcccgcaaggcccgcgagctcgtccgccgcaagagcgcgaccgacatcggcggcctg
cccggcaagctcgccgactgccgctcgaacgatccgagcaagtgcgagatctacatcgtg
gagggcgactccgcaggcggctcggccaagtccggccgcgactcgatgtaccaggcgatc
ctgccgctgcgcggcaagatcatcaacgtcgagaaggcccgcatcgaccgcgtcctcaag
aacgccgaggtccagtcgatcatcaccgcgttcggcaccggcatccacgacgagttcgac
atcagcaagctgcgctatcacaagatcgtgctgatggccgacgccgacgtcgacggtcag
cacatcgcgacgctgctgctgacgctgctgttccgattcatgcgtccgctcgtcgagcag
ggccacgtgtatctggcgcagccgccgctgtacaagctcaagtggcagaagggtgccgcg
ccggagttcgcgtactccgaccgcgagcgcgacggcctgctcgaggccggcctgtcctcg
ggcaagaagatcaacaaggacgacggcatccagcgctacaagggtctgggcgagatgaac
gccaaggaactgtgggagaccacgatggacccgagcgtccgcgtcctgcgccaggtcacc
ctggacgacgccgcggccgccgacgagctgttcagcgtcctcatgggcgaggacgtcgag
gcacgtcgcagcttcatcacccgcaacgccaaggacgtccgcttcctcgacgtctga
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