Prescottella soli: ABI214_19610
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Entry
ABI214_19610 CDS
T10552
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
psow Prescottella soli
Pathway
psow03020
RNA polymerase
Brite
Enzymes [BR:
psow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABI214_19610
Transcription machinery [BR:
psow03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABI214_19610
DNA repair and recombination proteins [BR:
psow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABI214_19610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XBK07168
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Position
4207819..4211778
Genome browser
AA seq
1319 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRNWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVIVGVDEELRHNELSTLEAEMEVEKKTVADQRDADLEARAQKLEAD
IAELEAEGAKSDVRRKVKDGGEREMRQLRDRAQRELDRLDEIWNTFTKLSVKQLIVDEGL
YREIVDRYGEYFTGAMGAESIQILMRNFDIEAEAESLRETIRSGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVINEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLFHLTRQVDGAIGEYK
PATDGQAEHGVYSSPAEAQMAVDRGVLSVQAGIKVRLTHQRPPREVEAELFPEGWNYGDA
WITETTLGRVMFNDLLPADYPFINEQMPKKRQATIINDLAERYPMIVVAQTVDKLKDTGF
YWATRSGVTVSISDVLVPPEKPQIMEQFEAQADQIEKKYQRGALNHAERNSALVKIWSEA
TDEVGKAMEAHFPDDNPIPMIVKSGAAGNMTQVRSLAGMKGLVTNPKGEFIPRPIKSSFK
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREVDCGTERGIITHI
AEKQADGTIIRDAHVETSTYARTLAADAVDENGNVIVERGHDLGDPAIDALLAAGVTQVK
VRSVLTCTTATGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGAA
GAADITGGLPRVQELFEARVPKGKAPIADVSGRVQLEDGERFYKITIVPDDGGEEVVYDK
LSKRQRLRVFKHDDGSERLLADGDHVDVGQQLMEGAADPHEVLRVMGPRQVQIHLVNEVQ
EVYRSQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLVERAEFEASNRRVVAEGGE
PAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLIGLKENVIIGKLIP
AGTGINRYRNIQVQPTEEARAAAYAVPSYDDQYYSPEGFGTGTGAAVPLDDYGFGSDYR
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgaactccgcatcggtctcgcgaccgcggaggacatc
cgcaactggtcctacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggtaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacgcgcgccaaggtgcgtcgtgagcgcatgggccacatcgagctcgcggctccc
gtgacccacatctggtacttcaagggtgtgccgagccgcctcggttacctgctcgacctg
gctccgaaggatctcgagaagatcatctacttcgccgcctacgtcatcgtcggtgtcgac
gaggagctgcgtcacaacgagctctccacgctcgaagccgagatggaggtcgagaagaag
accgtcgccgaccagcgcgacgccgatctcgaggcccgcgcccagaagctcgaagcggac
atcgccgagctcgaggccgagggtgccaagtccgacgtccgccgcaaggtcaaggacggc
ggcgagcgcgagatgcgtcagctccgtgaccgtgcccagcgtgagctggaccggctcgat
gagatctggaacaccttcaccaagctgagcgtcaagcagctcatcgtggacgagggtctg
taccgcgagatcgtcgaccgttacggcgagtacttcacgggcgcgatgggcgcggagtcc
atccagatcctcatgcgcaacttcgacatcgaggccgaggccgagtccctgcgcgagacc
atccgcagcggcaagggtcagaagaagctgcgcgccctcaagcgtctgaaggtcgtcgcc
gcgttccagcagtcgggcaactcgcccatgggcatggtcctcgacgccgtcccggtgatc
ccgccggagctgcgtccgatggtccagctcgacggtggccgtttcgcgacgtccgacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcgactgatcgacctc
ggggctcccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtcgacgcg
ctgttcgacaacggccgccgcggtcgtccggtcaccggtccgggtaaccgtccgctgaag
tcgctgtccgatctgctcaagggcaagcagggccgcttccgtcagaacctgctcggtaag
cgcgtcgactactcgggtcgttcggtcatcgtcgtcggtccgcagctcaagctgcaccag
tgcggtctgccgaagctgatggcgctcgagctgttcaagccgttcgtcatgaagcgtctg
gtcgacctcaaccacgcgcagaacatcaagtccgcgaagcgcatggtcgagcgtcagcgt
ccgcaggtgtgggacgtcctcgaagaggtcatcaacgagcacccggtgctgctgaaccgt
gcacctacgctgcaccgcctcggcatccaggctttcgagccgcagctcgtcgagggcaag
gccatccagctgcacccgctcgtctgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgtcggcagaggcgcaggccgaggcccgcatcctgatgctg
tcgtcgaacaacatcctgtcgccggcatcgggccgtccgctcgccatgccgcgtctggac
atggtgacgggtctgttccacctgacccgtcaggtcgacggtgcgatcggcgagtacaag
ccggccaccgacggtcaggcggagcacggcgtgtactcgtccccggccgaggcccagatg
gccgtcgaccgtggcgtgctgtccgtgcaggcgggtatcaaggtgcgtctgacgcatcag
cgtccgccgcgtgaggtcgaggcggagctgttccccgagggctggaactacggcgacgcc
tggatcaccgagacgactctcggccgcgtcatgttcaacgatctgctcccggcggactac
ccgttcatcaacgagcagatgccgaagaagcgtcaggcgacgatcatcaacgatctcgcc
gagcgttacccgatgatcgtggtcgcgcagaccgtcgacaagctgaaggacaccggcttc
tactgggccacccgttccggcgtgacggtctcgatctccgacgtcctcgtgccgccggag
aagccccagatcatggagcagttcgaggcgcaggccgaccagatcgagaagaagtaccag
cgcggtgctctcaaccacgccgagcgcaacagcgccctggtgaagatctggtccgaggcc
accgacgaggtcggtaaggccatggaggcccacttccccgacgacaacccgatcccgatg
atcgtgaagtccggcgcggccggcaacatgactcaggttcgctcgctcgccggtatgaag
ggcctggtgacgaacccgaagggtgagttcatcccgcgtccgatcaagtcctccttcaag
gagggcctgacggttctcgagtacttcatcaacacgcacggtgctcgtaagggtctggcc
gataccgcactccgcaccgccgactcgggctacctgacccgtcgtctggtggacgtctcg
caggacgtcatcgtccgcgaggtcgactgtggcaccgagcgcggcatcatcacgcacatc
gcggagaagcaggccgacggcacgatcatccgcgacgcgcacgtcgagacctcgacgtac
gcccgcaccctcgccgcggacgcggtcgacgagaacggcaacgtcatcgtcgagcgtggc
cacgacctgggcgatccggcgatcgacgcgctgctcgcagcgggtgtcacgcaggtcaag
gttcgctcggtgctcacctgcaccacggcgaccggtgtgtgtgccacgtgctacggccgc
tcgatggccaccggcaagctcgtcgacatcggcgaggccgtcggtatcgttgccgcgcag
tcgatcggtgagcccggtacccagctgacgatgcgtacgttccaccagggtggtgcggcc
ggcgcggccgacatcaccggtggtctgccgcgtgtccaggagctgttcgaggcccgtgtc
ccgaagggcaaggcgcccatcgcggacgtctccggccgggtgcagctcgaggacggcgag
cgcttctacaagatcaccatcgtcccggacgacggtggcgaagaggttgtctacgacaag
ctctcgaagcgtcagcgtctgcgcgtgttcaagcacgacgacggctccgagcgcctgctg
gcggacggtgaccacgtcgacgtcggtcagcagctcatggaaggtgctgccgacccgcac
gaggtgctgcgtgtcatgggcccccgtcaggtgcagatccacctcgtcaacgaggtccag
gaggtgtaccggagccagggtgtgtcgatccacgacaagcacatcgaggtcatcgtgcgc
cagatgctgcgccgcgtcacgatcatcgactcgggtgcgacggagttcctgcccggctcg
ctggtcgagcgcgcggagttcgaggcgtccaaccgtcgcgtcgtcgccgagggtggcgag
cccgcggccggccgtccggtgctgatgggtatcaccaaggcgtcgctggcgaccgactcg
tggctgtcggccgcgtccttccaggagaccactcgagtgctgaccgatgcggcgatcaac
tgccgctcggacaagctgatcggtctgaaggagaacgtgatcatcggcaagctgatcccg
gccggcaccggcatcaaccggtaccggaacatccaggttcagcccaccgaggaggctcgc
gcggctgcgtacgcggttccgtcttacgacgaccagtactacagcccggagggcttcggc
accggcaccggcgccgctgttccgctggacgactacggtttcggcagcgattaccgctag
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