Prescottella soli: ABI214_21890
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Entry
ABI214_21890 CDS
T10552
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psow Prescottella soli
Pathway
psow03420
Nucleotide excision repair
psow03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABI214_21890
03430 Mismatch repair
ABI214_21890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psow03400
]
ABI214_21890
Enzymes [BR:
psow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABI214_21890
DNA repair and recombination proteins [BR:
psow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABI214_21890
MMR (mismatch excision repair)
Other MMR factors
ABI214_21890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
XBK07588
LinkDB
All DBs
Position
4715718..4719104
Genome browser
AA seq
1128 aa
AA seq
DB search
MSSAASMPGIGRRVGPAELAEALGQFPPTAEQAAVIEAPLGPTLVVAGAGAGKTETMAAR
VVWLVANGLVDPEQVLGLTFTRKAAQQLTSRIRQRLAKLAGSSLVRDLDPGGGLRARILG
SEPEVSTYHSYAGRLLSEHGLLLPIEPSATLLSETELWQLAYRVVSAWDGDLDTDRNPAS
ITESVLALSGQLAEHLVEPEDLREAHTELDKLIHTLPAGPKQRGGPSKSLLGLLEVQHQR
LDLLPLVQRLAETLRREGALDFGSQMSLAARVASEHPEVGRSERARFRVVLLDEYQDTGH
AQRVLLSSLFGGGEDAGLALTAVGDPMQSIYGWRGASAANLPRFATDFPLADGTPAPTLE
LLTSWRNPPEALALANMVSDPLRDRGVEVSTLRARPGAVPGDVRLALHDTVETERAWVAD
RIAEQYEVARSDGGKPPTAAVLVRRNADAAPVAEELRARGLSVEVVGLGGLLHTPEVADV
VAMLRLVADPMAGSAAVRVLTGARWQIGAADLRALWKRAGELGIRSGYGTSGAVTDSEAL
DEALGSALPGEHSEQAGLADALADPGPAQRYSESGYVRICALAAELASLRERLGQPLTEL
VAEVERVIGIGIEAQARTRQSDVGGAGREHLDAFADVVSGYASRSSATLTGLLSYLAAAE
HVENGLAPGEIEVAPDRVQVLTVHSAKGLEWEVVAVPHLTEGVFPSTQASATWLGSVAEL
PPTLRGDRALSGESADGVPVLDLENVYDRKDLENEIEAHKKALGNRRLDEDRRLFYVALT
RTERALFVSGHHWTESGPKPKGPSPFLLELHDLVSTREGAPLGVIDVWAPAPEDGIENPL
TATPREAPWPRDPLGRRRPDVERGAQLVRDALGALDGPTSEPEEPEDDPDNWAADVDALL
AERSARVAGTADVELPAQMSVSQLVDLAADPDELAARLRRPLPFPPNPLARRGTAFHAWV
EQRFGATRLLDFDELPGAADTGVGTETELALLQDAFLRSPWADRNPVEVEVPFETSVAGT
VLRGRIDAVFADPDGGWTVIDWKTGAEPSAANERSVVMQLAAYRLAWAELMAARQSHATG
RPVAPPLDKVRAAFHYVRTGRTIAPENLPDAEHLARLIRSAGAEQTPG
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagcagcgagcatgccggggatcgggcgccgggtcggccccgccgaactggcc
gaggcgctcggccaattcccgccgacggccgaacaggccgcggtcatcgaggcgccgctg
ggcccgacgctggtcgtcgccggtgcgggcgcgggcaagaccgagacgatggccgcgcgt
gtcgtgtggctggtagccaacggactcgtggatcccgaacaggtcctcggcctgacgttc
acccgcaaggccgcgcagcagctcaccagccggatccggcagcggctcgccaagctcgcc
gggtcgtcgctggtgcgggacctcgacccgggcggcgggctgcgtgcccggatcctcggc
agcgagcccgaggtcagcacctaccactcgtacgccggccggctgctgtccgagcacggg
ctgctgttgccgatcgagccgtcggcgacgctgctgtccgagaccgaactgtggcaactc
gcgtaccgtgtggtgagcgcgtgggacggcgacctcgacaccgaccgcaacccggcgtcg
atcaccgagtcggtgttggcgctgtcggggcagctcgccgagcacctcgtcgaaccggag
gatctgcgcgaggcgcacaccgaactcgacaagctgatccacacgctgcccgccggtccg
aaacagcgtggcggaccgtccaagtcgctgctcggcctgctggaggtgcagcaccagcgt
ctggacctgctgccgctggtgcagcgcctggccgagaccctgcgccgcgagggcgcgctc
gacttcggcagtcagatgtcgctcgcggcgcgggtggcgtccgaacacccggaggtgggc
cgcagcgaacgcgcgcgcttccgtgtcgtgctgctcgacgagtaccaggacaccggtcac
gcgcagcgggtgctgctgtcgtcgctgttcggcggcggcgaggacgccgggctcgcgctc
accgcggtcggtgaccccatgcagtccatctacggttggcgcggcgcatcggcggccaac
ctgccgcgcttcgccacggacttcccgctcgccgacggcacccccgcccccacactcgag
ttgctcaccagttggcgcaacccgccggaggcgctcgcgctggcgaacatggtgtccgat
ccgctgcgcgaccggggcgtcgaggtcagcacgctgcgggcgcggccgggcgcggtcccg
ggcgacgtccgtctggcgctgcacgacaccgtcgagaccgagcgggcgtgggtggccgac
cggatcgccgagcagtacgaggtcgcgcggtcggacggcgggaaaccgcccaccgccgcg
gttctcgtgcgccgcaatgccgacgccgcccccgtcgccgaggaactgcgggcccgcggc
ctgtcggtggaggtcgtcggcctcggcggtctgctgcacacacccgaggtcgcggacgtc
gtcgcgatgctgcgcctggtcgccgaccccatggccggtagcgccgcggttcgtgttctc
accggcgcgcggtggcagatcggcgccgccgacctgcgcgcgttgtggaagcgcgccggc
gaactcggcatccggtcgggttacggcacgtcgggcgccgtcaccgactccgaagcactc
gacgaggctctgggcagcgcgttgccgggggaacactccgagcaggcgggcctggcggat
gcgctcgcggatcccggtccggcgcagcgctattcggagtccgggtacgttcgaatctgt
gcgctcgcggccgagttggcgtcgctgcgcgagcgtctgggacagccgctgacggaactg
gtggccgaggtcgaacgggtgatcggcatcggtatcgaggcgcaggcgcgtacccggcag
tccgacgtcgggggagcgggacgcgagcacctcgacgcgttcgccgacgtcgtgtccggg
tacgcgagccgctcctcggcgaccctgacgggactgctgtcgtacctcgcagccgccgag
cacgtcgagaacggcctggcccccggtgagatcgaggtcgcgcccgaccgggtccaggtg
ctgaccgtgcactcagcgaagggcctcgagtgggaggtcgtggccgtgccgcacctcacc
gagggcgtgttcccgtccacgcaggcgtcggccacgtggctcggttcggtggccgaactg
ccgccgacgttgcggggcgaccgcgcgctgtccggcgaatccgccgacggcgtcccggtt
ctcgacctcgagaacgtgtacgaccgcaaggacctcgaaaacgagatcgaggcccacaag
aaggcactggggaaccggcggctcgacgaggaccggcgcctgttctacgtcgcgctcacc
cgcaccgaacgggcgttgttcgtgtccggccatcactggaccgagtccggccccaagccg
aaggggccgtcgccgttcctgctggaactgcacgacctggtctcgacgcgggagggcgcg
ccgctcggcgtgatcgacgtgtgggcgcccgcccccgaagacggcatcgagaacccgctc
accgcgacgccgcgggaggcgccgtggccccgcgacccgctggggcggcgccgtcccgac
gtcgagcgcggtgcgcagctggtccgggacgcgctcggtgcactcgacggaccgacttcc
gaacccgaagagccggaagacgatccggacaactgggccgccgacgtggacgcactgctg
gccgagcgcagcgcccgggtggccgggacggccgacgtcgagctgcctgcgcagatgtcg
gtgagtcagctggtggacctggccgccgatcccgacgagttggccgcgcggctccgtcga
ccgctcccgttcccgccgaacccgttggcgcgccgtggaaccgcgttccacgcgtgggtc
gaacagcgcttcggggcgacgcgactgctcgacttcgacgagctgcccggcgccgccgac
accggtgtgggcaccgagaccgagctcgcgctcttgcaggacgcgttcctgcggtcgccg
tgggccgaccgcaacccggtcgaggtcgaggtgccgttcgagacctcggtcgcgggcacc
gtcctgcgcggccggatcgacgcggtgttcgccgaccccgacggcggctggaccgtcatc
gactggaagaccggcgccgagccgtccgccgcgaacgagcggtccgtcgtgatgcagctc
gccgcctaccggctggcgtgggcggagctcatggccgcccggcagtcgcacgccaccggc
cgacccgtcgccccaccgctggacaaggtgcgcgcggcgttccactacgtgcggaccgga
cggaccatcgccccggagaatctgccggacgccgagcatctcgcccggttgatccgcagc
gcgggggcggagcagacgcccggatga
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