KEGG   Prescottella soli: ABI214_22670
Entry
ABI214_22670      CDS       T10552                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
psow  Prescottella soli
Brite
KEGG Orthology (KO) [BR:psow00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psow03032]
    ABI214_22670
   03036 Chromosome and associated proteins [BR:psow03036]
    ABI214_22670
   03400 DNA repair and recombination proteins [BR:psow03400]
    ABI214_22670
DNA replication proteins [BR:psow03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    ABI214_22670
Chromosome and associated proteins [BR:psow03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    ABI214_22670
DNA repair and recombination proteins [BR:psow03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      ABI214_22670
SSDB
Motif
Pfam: Bac_DNA_binding HC2 HU-CCDC81_euk_2 HU-HIG HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: XBK07714
LinkDB
Position
4870319..4871029
AA seq 236 aa
MNKAELIDVLTEKLGTDRRTATEAVEHVVDTIVRAVHAGDSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKALIAGGQKLPSSGPAVKRGAAEPVKKAAAKKTAA
KKAAAKKTAAKKTAAKAPAKTVAKKTAAKAPAKTVAKKTAAKAPAKKVVAKKTVAKKTAA
KAPAKTVAKKTAAKAPAKKVVAKKTVAKKTAAKAPAKTAAKKTAAKKAPAKRTARK
NT seq 711 nt   +upstreamnt  +downstreamnt
atgaacaaggcagagctcatcgatgttctgaccgagaaactgggcacggatcggcgcacc
gccaccgaggctgtcgagcatgtcgtcgacaccatcgtgcgggccgtccatgccggggac
agtgtcaccatcaccggattcggtgtcttcgagcagcgtcgccgcgcggcccgtgtcgcg
cgcaacccgcgcaccggcgagaccgtcaaggtcaagccgacgtcggttccggccttccgt
ccgggcgcacagttcaaggcactcatcgccggtggccagaagctgccgtccagcggcccg
gccgtcaagcgtggtgcggctgagcccgtgaagaaggctgcggccaagaagacggcggcc
aagaaggctgccgccaagaagactgcggcgaagaagactgcggccaaggctcccgccaag
accgtggcgaagaagaccgcggccaaggctcccgccaagaccgtggcgaagaagaccgcg
gccaaggctcccgccaagaaggtcgtcgcgaagaagaccgtcgcgaagaagactgcggcc
aaggctcccgccaagaccgtggcgaagaagaccgcggccaaggctcccgccaagaaggtt
gtcgcgaagaagaccgtcgcgaagaagactgcggccaaggctcccgccaagaccgcagcc
aagaagaccgcggccaagaaggctccggccaagcgcaccgcccgcaagtaa

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