Prescottella soli: ABI214_24815
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Entry
ABI214_24815 CDS
T10552
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psow Prescottella soli
Pathway
psow03030
DNA replication
psow03430
Mismatch repair
psow03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABI214_24815 (dnaE)
03430 Mismatch repair
ABI214_24815 (dnaE)
03440 Homologous recombination
ABI214_24815 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psow03032
]
ABI214_24815 (dnaE)
03400 DNA repair and recombination proteins [BR:
psow03400
]
ABI214_24815 (dnaE)
Enzymes [BR:
psow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABI214_24815 (dnaE)
DNA replication proteins [BR:
psow03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABI214_24815 (dnaE)
DNA repair and recombination proteins [BR:
psow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABI214_24815 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Stork_head
Motif
Other DBs
NCBI-ProteinID:
XBK08098
LinkDB
All DBs
Position
5325389..5328925
Genome browser
AA seq
1178 aa
AA seq
DB search
MADSFVHLHNHTEYSMLDGAAKVGPLFKEAERLGMTAVGMTDHGNMYGASEFYNVAKKHG
IKPIIGIEAYIAPESRFNTKRVLWGDPSQKSDDVSGSGAYTHMTMVAENSTGLRNLFKLS
SLASIEGQLGKWPRMDEDLIAHHAEGIIATTGCPSGEIQTRLRLGHDREALEAAAKWQEI
WGKDNFFLELMDHGLSIERRVREGLIEIGRKLDIRPIATNDCHYVTKDAAENHEALLCIQ
TGKTLSDPTRFKFDGDGYYLKSAEEMRAIWDEEVPGACDNTMLIGERVQPYEDVWQHRDR
MPIFPVPEGHTQQTFLRHEVLRGLDRRFPSGPPQEYLERADYEIGVINEMGFPAYFLVVG
DLINHAREVGIRVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERVSMPDIDID
FDDRRRGEMVRYATEKWGNDKVAQVITFGTIKTKAAIKDSARVQFGQPGFAIADQITKAL
PPPIMAKDISVSGITDPEHERYKEAVEVRALIDSNPDVAKIYQTAKGLEGLIRNAGVHAC
AVIMSSEPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAIENIK
ANRGIDIDLDTLPIEDPATYELLARGDTLGVFQLDGSAMRDLLRRMQPTGFEDIVAVLAL
YRPGPMGMNAHNDYADRKNGRQDVKPIHPELEEPLKDILKDTFGLIVYQEQIMQIAQKVA
GYSLGQADLLRRAMGKKKKEILDEAYDGFADGMKANGFSQAAITALWDTVLPFAGYAFNK
SHAAGYGLVSFWTAYLKANYPSEYMAGLLTSVGDDKDKAAVYLSDCRKMGITVLPPDVNA
SRVDFASVGEDIRFGLGAVRNVGANVVGSIIAAREEKGSFTDFSDYLNKIDALACSKKVT
ESLIKAGGFDSLEHPRKGLMLVHADAIDAVMGTKKAEAMGQFDLFGGEDADESIASVFNV
KVPDEEWDAKHKLALEREMLGLYVSGHPLNGVEHVLAAQSDTSIPVILEGDIKDGTQVTV
GGILASVNRRINKNGLTWASAQLEDLSGGIEVLFFPQAYSVYGMDVVEDSVVLVKARVSI
RDDRVSLIANDLAVPDLSAIGVAKPVSVSLPVRQCTKEKLGALRQVLSRHPGTADVHVKL
IGSRGTSLWKVDEVLRVEPSSSLMGDLKALLGPSCLAG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
gtggctgactcgttcgttcacctgcacaaccacaccgagtactcgatgctcgacggtgcg
gcaaaggtcggcccgttgttcaaggaggccgagcgcctcgggatgacggcggtcggcatg
accgaccacggcaacatgtacggcgcgagcgagttctacaacgtcgccaagaagcacggg
atcaagccgatcatcggcatcgaggcgtacatcgcgccggagtcgcggttcaacaccaag
cgcgtgctgtggggcgacccgagccagaagtccgacgacgtctcgggtagcggtgcatac
acccacatgacgatggtcgccgagaattcgaccggactgcggaacctgttcaagctgtcg
tcgctcgcgtcgatcgagggtcagctcggcaagtggccgcgcatggacgaggacctgatc
gcccaccatgccgagggcatcatcgcgaccacgggttgcccgtccggcgagatccagacc
cggttgcgcctcggccacgaccgcgaggccctcgaggccgccgcgaagtggcaggagatc
tggggcaaggacaacttcttcctcgagttgatggaccatgggctctcgatcgagcggcgc
gtgcgcgagggtctgatcgagatcggcaggaagctcgacatccggccgatcgccaccaac
gactgccactacgtcacgaaggacgccgccgagaaccacgaggctctgctgtgcatccag
accggcaagacgctgtcggacccgacgcgattcaagttcgacggtgacggctactacctg
aagtccgccgaggagatgcgagccatctgggacgaggaggtcccgggcgcgtgcgacaac
acgatgcttatcggcgagcgggtgcagccgtacgaggacgtgtggcagcaccgggaccgg
atgccgatcttcccggtccccgagggacacacgcagcagacgttcctccgacacgaggtg
ctgcgcggcctcgaccggcgtttcccgtccgggccgccgcaggagtacctcgagcgtgcc
gactacgagatcggcgtcatcaacgagatgggcttccccgcctacttcctcgtggtcggc
gacctcatcaaccacgcccgcgaggtcggcatccgcgtcggccccggccgaggctcggcg
gccggttcgctcgtcgcgtacgcgatgggcatcaccaacatcgatcccatcccgcacggc
ctgctgttcgagcggttcctcaaccccgagcgtgtgtcgatgcccgatatcgatatcgac
ttcgacgatcgccgccgcggcgagatggtccgctacgccaccgagaagtggggcaacgac
aaggttgcgcaggtcatcacgttcggcaccatcaagacgaaggccgcgatcaaggactcc
gcgcgagtccagttcggccagcccggtttcgcgatcgccgaccagatcaccaaggcgctg
ccgccgccgatcatggcgaaggacatctcggtgtcgggcatcaccgaccccgagcacgag
cggtacaaggaggccgtcgaggtccgtgccctcatcgactccaaccccgatgtcgcgaag
atctaccagaccgcgaagggcctcgagggcctgatccgcaacgcaggcgtgcacgcctgc
gcggtcatcatgtcgtcggagccgctcaccgacgcgatcccggtgtggaagcgcgcccag
gacggcgcgatcatcaccggctgggactacccgtcgtgcgaggccatcggcctgctgaag
atggacttcctcggtctgcgcaacctcacggtcatcggtgacgcgatcgagaacatcaag
gccaaccgcggcatcgacatcgatctcgacaccctgccgatcgaggaccccgccacctac
gagttgctcgcccgcggcgacacgctcggcgtgttccagctcgacggcagcgcgatgcgc
gatctgctgcggcgcatgcagcccacgggcttcgaggacatcgtcgcagtcctggcgctg
taccggcccggtccgatgggcatgaacgcgcacaacgactacgccgatcgcaagaacggc
cgccaggacgtcaagccgatccacccggagctcgaggagccgctgaaggacatcctgaag
gacaccttcggtctgatcgtctaccaggagcagatcatgcagatcgctcagaaggtggcc
ggctactcgctcggacaggcagacctgctgcgtcgagcgatgggtaagaagaagaaggag
atcctcgacgaggcctacgacggcttcgccgacggcatgaaggccaacggtttctcgcag
gcggcgatcaccgcgctgtgggacacggttctgccgttcgccggctacgcgttcaacaag
tcgcacgccgccggctacggcctcgtctcgttctggaccgcgtacctcaaggccaactac
ccgtccgagtacatggcgggcctgctcacctcggtcggtgacgacaaggacaaggccgcg
gtgtacctgtcggactgccggaagatgggcatcaccgtgctgccgccggacgtcaacgcg
tcccgcgtcgacttcgcgtccgtcggcgaggacatccggttcggcctcggcgcggtgcgc
aacgtcggcgccaacgtggtggggtcgatcatcgcggcccgtgaggagaaggggagcttt
accgacttctccgactacctcaacaagatcgacgcgctggcctgttccaagaaggtcacc
gaatctctcatcaaggcaggcggattcgactccctcgagcatccgcgtaagggtctgatg
ctggtgcacgccgacgcgatcgacgcggtgatgggcaccaagaaggccgaggcgatggga
cagttcgacctgttcggcggcgaagacgccgacgaatcgatcgcgtccgtgttcaacgtc
aaggtgcccgacgaggagtgggatgccaagcacaagctcgccctcgagcgggagatgctc
ggtctgtacgtgtccggccatccgctcaacggtgtcgagcacgtgctggcggcgcagtcc
gacacctcgatcccggtgatcctcgagggcgacatcaaggacggcacccaggtcaccgtc
ggcggcatcctcgcgtcggtcaatcggaggatcaacaagaacggcctgacgtgggcgtcc
gcccagctcgaagacctctcgggcggcatcgaggtactgttcttcccgcaggcgtactcg
gtgtacggcatggacgtcgtcgaggactcggtggtcctggtcaaggcgcgtgtgtcgatc
cgcgacgatcgggtgtcgctgatcgcgaacgatcttgcggtgccggacctttcggcgatc
ggcgtggcgaagccggtgtcggtgagcctgccggtgcggcagtgcaccaaggagaagctc
ggtgcgctccggcaggtgctctcgcggcatcccgggactgcggacgtgcacgtcaagctc
atcggatcgcgcggcacctccctgtggaaggtggacgaggtactccgggtggagccgtcg
tcgtcgctgatgggtgatctgaaggcgctgctcgggcccagttgcctggcgggctga
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