Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_0133
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Entry
PSPPH_0133 CDS
T00266
Name
(GenBank) conserved hypothetical protein
KO
K11900
type VI secretion system protein ImpC
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSPPH_0133
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psp02044
]
PSPPH_0133
Secretion system [BR:
psp02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSPPH_0133
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
TssC
TSP_NTD
Motif
Other DBs
NCBI-ProteinID:
AAZ34098
UniProt:
Q48Q73
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All DBs
Position
complement(156880..158382)
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AA seq
500 aa
AA seq
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MTDKQPVTQQDSALVEVENFAPQSSLLDSIISESRVARSETERTRTRDLIGELVAQVLEG
EMTPSKDLIAVLDARIAEIDSMLSEQMNEIMHAREFQQLEASWRGLKYQVDQTETSTTLK
IHLLNASKKDLVRDLKASSEFDQSALFKKIYEEEYGTFGGAPFGMLLGDYEFNRSPEDMY
LLEEISHVAAAAHAPFISAASAELFGWDSFTDMAGPRDLAKIFDTVEYAKWKSFRASEDS
RYVGLTLPHVLGRLPYGPDTTPVEEFNFVESVDGRDHNKYLWMNAAYALGTRVTDAFSRY
GWCVAIRGVEGGGLVEGLPTHTFKTDDGEIALKCPTEIAITDRREKELSDLGFIPLVHCK
GTDYAAFFGTQSTQKQKQYNTDIANANARLSAQLQYIFATSRIAHYMKAIMRDKIGSFAS
RKDVELFLNKWLSSYVLLDDTASQEAKAKFPLREARAEVFEVPGKPGVYKAVTYLRPHYQ
LDELTASLRLVAELPQSTRG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataagcaacccgtgactcagcaggacagcgctctggttgaagttgaaaacttc
gccccgcaatcctccctgctcgacagcatcatttccgaaagccgcgttgcacgctccgaa
accgagcgcactcgtacccgcgatctgatcggcgaactcgtggcccaggtgctggaaggc
gagatgacgccgagcaaagacctgattgccgtgctcgacgcgcgcatcgccgagatcgat
tcgatgctctccgagcagatgaacgaaatcatgcacgcccgtgaattccagcaactggaa
gcgtcctggcgcggcctgaaatatcaggttgaccagaccgagaccagcaccacgctgaag
attcacctgctcaatgcgtcgaaaaaagacctcgtgcgtgacctcaaggcctcgtccgaa
ttcgaccagagcgcactgttcaagaagatctacgaagaagagtacggcaccttcggtggt
gcaccgttcggtatgttgctgggggactacgagttcaaccgcagcccggaagacatgtac
ctgctcgaggagatctcccacgttgcagccgccgcccacgcgccgttcatttccgcggca
tcggctgagttgttcggttgggactcgttcaccgacatggccggccctcgcgatctggcg
aaaatcttcgataccgtcgaatacgccaaatggaagtcgttccgcgcctctgaagactcc
cgctatgtcggcctgaccctgccgcacgtgctgggtcgcctgccatatggtccggatacc
acgcccgtcgaagaattcaacttcgtcgaaagcgtcgatggccgtgaccacaacaaatac
ctgtggatgaacgctgcctacgcactgggcactcgcgtgaccgatgcattctcccgctac
ggctggtgtgtggcgatccgcggcgtggaaggcggcggtctggtcgaaggcctgccgacc
cacaccttcaagaccgatgacggcgaaatcgcgctgaaatgcccgactgaaattgccatc
accgaccgtcgcgaaaaagagctgtcggacctggggttcattcctctggtgcactgcaaa
ggcaccgactacgccgcattcttcggcactcagtcgacccagaagcagaagcagtacaac
accgacattgccaacgccaacgcgcgtctttcggcgcaactgcaatacatcttcgcgacc
tcgcgtatcgctcactacatgaaagcgatcatgcgcgacaagatcggcagtttcgcatcg
cgcaaggatgtcgagttgttcctcaacaagtggctgtccagctacgtgttgctggatgac
accgccagtcaggaagccaaggccaagttcccgttgcgcgaagcgcgtgccgaagtgttt
gaagttcccggcaagcctggcgtctacaaggccgtgacctacctgcgtccgcattaccaa
ctggatgaactgacagcatcgttgcgtctggtcgccgaattgccgcaatcgactcgcggc
tga
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