Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_0259
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Entry
PSPPH_0259 CDS
T00266
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp03030
DNA replication
psp03410
Base excision repair
psp03420
Nucleotide excision repair
psp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSPPH_0259 (polA)
03410 Base excision repair
PSPPH_0259 (polA)
03420 Nucleotide excision repair
PSPPH_0259 (polA)
03440 Homologous recombination
PSPPH_0259 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psp03032
]
PSPPH_0259 (polA)
03400 DNA repair and recombination proteins [BR:
psp03400
]
PSPPH_0259 (polA)
Enzymes [BR:
psp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSPPH_0259 (polA)
DNA replication proteins [BR:
psp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSPPH_0259 (polA)
DNA repair and recombination proteins [BR:
psp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSPPH_0259 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSPPH_0259 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Obc1_cap
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
AAZ35823
UniProt:
Q48PV5
LinkDB
All DBs
Position
complement(299793..302558)
Genome browser
AA seq
921 aa
AA seq
DB search
MTQAPLVLIDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRRQYPDSPFAVVFD
AKGGTFRDALYTDYKANRPSMPDDLRVQVDLLHACVKGMGYPLLCVEGVEADDVIGTLAR
SSAAADRPVIISTGDKDMAQLVDGHITLVNTMTGSALDVAGVKEKFGVGPEHIIDYLALM
GDKVDNIPGVPGVGEKTAVGLLVGVGGGIKELYERLETVATLPIRGAKTLAAKLEEHRAM
AFLSYELATIKIDVPLDIELDQLHCGEPDRDKLMELYAELEFKSWIEDLQRDAKRAGQEL
AVEEPTVEAKEAAYEVILEQSQFDAWLKKLNAAPLFAFVIQSNGTDAQRAQLVGLSFAIQ
THEAAYIPLTHSYMGVPQQLDRDTVLKALKPLLEDPDKTKVGQHAKFAINLLANCALDGD
QTQGIDLQGVRFDTILESYVLDSTATRHDRDSLVAKYLTHTPINFQEIAGKGAKQLTFDQ
IAIEQAGDYAAEEADLTLRLHEVFEARLAAIPTLQPVLNDIEMPLVPVLAGIERQGALVD
ANLLGIQSVELGDKMTALEREAFAIAGEEFNLGSPKQLGVILYEKLGMPILSKTATGQAS
TAEAVLAELAEQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAVTG
RLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAQDEGLLHAF
RNDLDVHRATAAEVFGVELENVTTDMRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQAY
VDRYFARYPGVLDYMERTRAQAAEQGFVETIFGRRLYLPDINAKNQSLRKGAERMAINAP
MQGTAADIIKKAMVAVNGWLEESGLDARVILQVHDELVLEVREDLVDQISEQIRPHMSGA
AELAVPLLVEVGVGNNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagcgccgctcgtcctgatagacggttcctcttacctctatcgcgccttccac
gcactgccaccactgaccacgtccaaaggattgccgacgggtgccgtcaagggcgtgctc
aacatgctcaaaagcctgcgtcgccagtacccggacagcccgtttgcggtggtcttcgat
gccaagggcgggactttccgcgacgcgctgtataccgattacaaagccaatcggcccagc
atgccggatgacctgcgcgtgcaggtcgatctgctgcatgcttgcgtcaagggcatgggc
tatccgctgctatgcgtggaaggcgttgaagcagacgacgtgatcggcaccctggcgcgc
agcagcgcagcggcggaccgtccggtgatcatctccaccggtgacaaggacatggcgcaa
ctggtcgacggacacatcaccctggtcaacaccatgaccggcagcgccctggacgtggct
ggcgtgaaagagaagttcggcgtcggtccggagcacatcatcgactacctcgcactgatg
ggcgacaaggtcgacaacatacctggcgtccccggcgtcggcgaaaagactgccgtcggc
ttgctggttggcgtgggcggcgggatcaaggagctttacgagcgcctcgaaacggtcgcg
accctgcctattcgtggggccaagaccctggcggcgaagcttgaagagcatcgtgcgatg
gccttcctgtcctatgaactggcaactatcaagatcgacgtgccactggacatcgaactg
gaccagttgcattgcggcgagccggaccgcgacaaattgatggagctgtacgccgagctg
gaattcaaaagctggatcgaagacctgcaacgtgatgccaaacgcgccgggcaggagctg
gccgtcgaagagccaaccgtcgaggcaaaagaagccgcctatgaagtcattctcgagcag
agccagttcgacgcgtggctgaagaagctcaacgccgcgccgctgttcgcctttgtgatc
cagagcaacggcaccgacgcccagcgcgcgcaactggtaggtttgtcttttgccattcaa
acccatgaagccgcctacattccgctgacccactcctacatgggggtgccgcagcaactg
gaccgagacacagtactcaaggcgctcaagccgctgcttgaagacccggataaaaccaag
gtcggtcaacacgccaagttcgctatcaacctgcttgccaactgcgcgctcgacggcgat
cagacacaaggcatcgacctgcagggcgtcaggttcgacaccattctggaatcctacgtt
ctggattccactgccacccgccacgaccgtgacagcctggtggccaagtacctgacgcac
acgccgatcaacttccaggagatcgccggcaaaggtgccaagcagctgaccttcgaccag
atcgccatcgagcaggctggtgattatgctgccgaagaagccgacctgaccctgcgcctg
catgaagtcttcgaagcgcgtctggccgcaattccaaccttgcagccggtcttgaacgac
atcgagatgccgctggtgcccgtccttgcaggcatcgaacgccagggcgcactggtcgat
gccaacctgctgggcatccagagcgtcgaactgggcgacaagatgaccgcgctggagcgc
gaagcctttgctattgccggtgaagagttcaacctgggctcgcccaagcagctcggcgtg
attctctacgaaaagctcggtatgccgatcctcagcaagaccgctaccggccaggcatcg
actgccgaggccgtgctggccgaactcgccgagcaggacttcccgctgcccaaggtactg
atgcaataccgctcgatgagcaagctcaagagcacttacaccgaccgcctgccggagcag
atcaacccgcgcaccggacgcattcacacctcctatcaccaggcagtggcggtgaccggg
cgcttgtcatccagcgatccgaacctgcagaacatcccgatccgtactgctgaaggccga
cgcatccgtcaggcgttcgtggcccccaagggctacaagctgctggcggcagactattcg
cagatcgaactgcgcatcatggcgcatctggcacaggacgaaggcttgctgcatgccttc
cgcaacgacctggacgttcaccgcgcgacggcagcggaagtcttcggcgtcgagctggaa
aacgtcaccacggacatgcgccgcagcgccaaggcgatcaacttcggcctgatctacggc
atgagcgcgtttggcctggccaaacagattggcgtggaccgcaagcagtcacaggcttat
gtcgaccgttacttcgcccgctaccccggcgtgctggattacatggagcgcacacgtgcg
caggccgccgagcagggttttgtcgagaccattttcggccgtcgcctgtacttgccggac
atcaacgccaagaaccagtccctgcgcaaaggtgccgaacgcatggcgatcaacgcgccg
atgcaaggcactgcggcggacatcatcaagaaagccatggtggccgtgaatggctggctg
gaagaatccggtctggatgcgcgggtcattctgcaggtgcatgacgaactggtgctggag
gtgcgcgaagacctggtcgatcagatcagtgaacagatccgcccacacatgagtggcgca
gcagaattggcagtgccgctgctggtggaagtcggggtcggcaacaactgggacgaggcg
cactga
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