Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_0449
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Entry
PSPPH_0449 CDS
T00266
Name
(GenBank) ATP-dependent RNA helicase RhlE, putative
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSPPH_0449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psp03019
]
PSPPH_0449
Enzymes [BR:
psp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PSPPH_0449
Messenger RNA biogenesis [BR:
psp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSPPH_0449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AAZ36206
UniProt:
Q48PB7
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All DBs
Position
complement(510601..512478)
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AA seq
625 aa
AA seq
DB search
MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL
ERLFPNGVPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKLYARDLKFVSACIFGGVGMN
PQVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR
LPAKRQNLLFSATFSNDITSLAGKLLHNPERIEVTPPNTTVERIEQRVFRLAANHKRSLL
AHLITVGAWEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKALADFKAGDV
RIMVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKL
LKSIERMTKQKIADGDLMGFDITAVEAEKPEVRERPDVRNSRGARPAGDKNNGGRRDKGK
DKGKEKPAAAAATGERPARQPREKKPREGTPRSEQRASQPSIPRPAADRAPDEFRDDEVD
NFGNRADYVSPYQGKGQNRGRRPAAAPGAAPAAGGAARPANSGRPAGGARNGSGTGAPKR
NGSGSSAPRSRDGQPRGRRPAREDQPLPREGQEPAVRAPRDGQPQPKIVHKESKIDRFPS
AEQLDQLPTRPRGEKPALLTRNRDS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgcttccctcggtctctccgaggctttagtccgcgccatcgaggcagcgggc
tatacccagcctacccccgtgcaacagcgggccattcccgccgtgttgcaaggtcgcgac
ctgatggttgcggcgcagaccggtactggtaaaaccggtggtttcgccctccctattctg
gagcggctgtttcccaatggtgttccggacaaatcccagcgtcacggcccgcgtcaacca
cgcgttctggtcctgaccccgacccgcgaactggccgcacaggtgcacgagagcttcaag
ctctatgcccgcgacctgaaattcgtcagcgcctgcatcttcggtggcgtcggcatgaac
ccgcaggttcaggccatgtcccgtggtgtagacgtcctggtggcctgccctggccgcctg
ctcgacctggccggtcaaggcagtgtcgacctgtcccacgtcgaaatcctggtgctcgat
gaagcagaccggatgctcgacatgggcttcgtccatgacgtgaaaaaggtcctcgcgcgg
ctgccggccaagcgccagaacctgctgttctcggctaccttctccaatgacatcacgtcg
ttggccggcaagctgctgcacaacccagagcgcatcgaagtcacgccgccgaacaccacg
gtcgagcgtatcgagcaacgggttttccgccttgccgccaaccacaagcgttcactgctg
gcgcacctgattaccgtcggtgcctgggaacaggtgctggtcttcacccgcaccaagcac
ggcgccaaccgtctggccgagtacctggacaagcacggccttgcggcggtcgcgatccac
ggcaacaagagccagaacgcccgtaccaaggcactggccgacttcaaggcaggtgatgta
cgcatcatggttgcgaccgatatcgccgcacgcggcctggatatcgaccagctgccgcat
gtcgtcaacttcgagctgccaaacgtcgatgaagactacgttcaccgtatcggtcgtacc
ggccgggccggtcgttcgggcgaagccatttccctggttgcgccggacgaagagaagctg
ctcaaaagcattgagcgcatgactaaacagaagatcgccgatggcgacctgatgggcttc
gacatcaccgcagtcgaggctgaaaaaccggaagtgcgtgagcgtccggatgttcgcaac
tctcgtggtgcacgtcctgccggcgacaagaacaacggcggtcgtcgcgacaagggcaag
gacaaaggcaaggaaaaacctgccgctgcagccgccactggcgaacgccctgcaaggcag
ccacgcgaaaaaaaacctcgtgagggcacgcctcgcagcgaacagcgtgcatcgcagcca
tccataccgcgcccggcagccgatcgtgcgccggacgagttccgcgatgatgaagtagac
aacttcggcaatcgtgctgactacgtcagtccttatcagggcaaaggccagaaccgtggt
cgtcgtcctgctgctgcgcccggtgcagcaccggctgctggcggcgcagctcgcccagcc
aattcgggtcgacctgcgggcggcgctcgtaacggttccggtactggcgcgccaaagcgc
aacggttcgggttcgtcggctccgcgttcgcgtgatggccagccgcgcggtcgtcgcccg
gcacgtgaagatcagcccttgccgcgtgaaggtcaggagccagccgtgcgtgccccgcgc
gacggtcagcctcagccgaagatcgtgcacaaggaatccaagatcgaccgtttcccgtct
gccgagcaactggaccagttgccaacacgcccacgcggtgaaaaaccggccctgctgacc
cgcaatcgcgacagctga
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