Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_0506
Help
Entry
PSPPH_0506 CDS
T00266
Symbol
dbpA
Name
(GenBank) ATP-independent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psp03009
]
PSPPH_0506 (dbpA)
Enzymes [BR:
psp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PSPPH_0506 (dbpA)
Ribosome biogenesis [BR:
psp03009
]
Prokaryotic type
rRNA helicases
PSPPH_0506 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
ESX-1_EspG
PRAI
SBP_bac_3
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AAZ34481
UniProt:
Q48P61
LinkDB
All DBs
Position
complement(586776..588215)
Genome browser
AA seq
479 aa
AA seq
DB search
MRSGWRVIHYATFLFCRSTVVTNTAFNSLPLSAAMLANLESLGYAEMTPIQAQSLPVILK
GMDLIAQAKTGSGKTAAFGIGLLNPINPRFFGCQALVMCPTRELADQVAKEIRRLARSED
NIKVLTLCGGVSFGPQIGSLEHGAHIIVGTPGRIQQHLRKGSLVLDGLNTLILDEADRML
DMGFYDAIADIIEQTPQRRQTLLFSATYPVGIKQLSSKFMRDPQTVKVEALHADSQIDQI
FYEISPEQRLEAVVKVLGHFRPASCVAFCFTKQQVQEVVDHLTAKGMSAVGLHGDLEQRD
RDQVLAMFANRSTSVLVATDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKG
IAVSLVAPSESQRARAIEELQKAPLNWQQYDQLSIKEGGKLLPTMTTLCIGSGRKDKLRP
GDILGALTGEAGIAGTQVGKIAIFDFQAYVAVERSMAKQALERLNNGKIKGKSLRVRIL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtctggctggcgggtgatacactacgcgacatttttgttttgcaggtccaccgtc
gtgactaacaccgctttcaattctctgcctctgtccgctgccatgctggctaacctggag
tcgcttggttatgccgaaatgacaccgattcaggcgcagagcctgccggtgatcctcaag
ggcatggacctgatcgcgcaagccaagaccggcagcggcaagaccgctgccttcggtatc
ggcctgctcaacccgatcaacccgcggttcttcggttgccaagcactggtcatgtgcccg
acccgcgaactggcggatcaggtcgccaaggaaatccgccgtctggcgcgctcggaagac
aacatcaaggtgctgaccctctgtggcggcgtgtctttcggcccgcagatcggctcgctg
gagcacggcgcgcacatcatcgtcggtacgccggggcgtattcagcagcatttgcgcaag
ggttcgctggtcctggacggcctgaacacgctgatcctcgatgaagccgaccgcatgctg
gacatgggcttctacgacgccatcgccgacatcatcgagcagaccccgcagcgccgtcag
accctgctgttctccgcgacctacccggtcggcatcaagcagctgtcgtcgaaattcatg
cgtgacccacagaccgtaaaagtcgaagcgctgcacgccgacagccagatcgatcagatt
ttctatgaaatctctccggaacagcgtctggaagcggtggtcaaggtactcggtcatttc
cgtccggcgtcctgtgtggcgttctgtttcaccaagcagcaggttcaggaagtggtcgac
cacctgaccgccaaaggcatgtctgccgtcggtctgcatggtgatctggaacagcgcgac
cgcgatcaggtgctggcgatgttcgccaaccgtagtacctcggtactggtcgccaccgac
gtggccgcgcgcggtctggacatcgacgcactggacatggtgatcaacgtcgagctggcg
cgagattcggaaatccacattcaccgcgtaggccgtaccggtcgcgcaggcgaaaaaggc
atcgcggtcagccttgtggcaccgtcggaaagccagcgcgcccgcgctatcgaagagttg
cagaaagccccgttgaactggcagcagtacgatcagctaagtatcaaggaaggcggcaag
ctgctgccgaccatgacgacgctgtgcatcggttcgggtcgcaaggacaaactgcgcccg
ggcgacattcttggcgcgctgaccggcgaagcgggtattgcgggcactcaggtgggcaag
atcgcgatcttcgatttccaggcttacgtcgccgtcgaacgcagcatggccaagcaggcc
ctggagcgtctgaacaacggcaagatcaaaggcaagtcgctgcgcgtgcgaatcctctga
DBGET
integrated database retrieval system
