Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_0565
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Entry
PSPPH_0565 CDS
T00266
Name
(GenBank) Hfq protein
KO
K03666
host factor-I protein
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Pathway
psp02024
Quorum sensing
psp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSPPH_0565
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSPPH_0565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psp03019
]
PSPPH_0565
03036 Chromosome and associated proteins [BR:
psp03036
]
PSPPH_0565
Messenger RNA biogenesis [BR:
psp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PSPPH_0565
Chromosome and associated proteins [BR:
psp03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PSPPH_0565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AAZ36074
UniProt:
Q48P02
LinkDB
All DBs
Position
664404..664664
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AA seq
86 aa
AA seq
DB search
MSKGHSLQDPYLNTLRKEKVGVSIYLVNGIKLQGTIESFDQFVILLKNTVSQMVYKHAIS
TVVPVRPIRLPSATDADGADAEPGNA
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagggcattcgctacaagacccttacttgaataccttgcgaaaagagaaggtc
ggggtatcgatctacctggtcaacggtatcaagctgcagggcacgatcgagtctttcgac
cagttcgtcattttgctgaagaatactgtcagccagatggtctacaaacacgccatttcc
accgtcgtaccggttcgcccgattcgccttcccagcgctaccgacgctgacggcgcagac
gccgagccaggtaacgcctga
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